BS19926.complete Sequence
2282 bp assembled on 2011-01-28
GenBank Submission: KX804551
> BS19926.complete
GAAGTTATCAGTCGACATGAATCGCAATCGAATCAATCAGATACGCCAGT
TAGATCGCGGCCAGGAGGGACTGCCGCAAGTCATCCAAATGCAGGGACAG
GCACAGGTTCAGCTGGGCGGCGACCAGGGTAATCACGTCGGCAACGAGGG
ACAAGCGACGGGCAATCAGAATGTCCGCCGCAAGATGACCTACACCAGAA
CGGAGATGCTGTCGCGTGGCCTGCCCACCGTTAACAACAGCAATCGTTCG
GCTCGAAACTGCAACACAGCTGGACAGGATTGGACCAGTCAATTGTCGCC
CAGACATCGTTACGCACAACCACCAAAGTCCGGAATACCGGTCCCTCCGT
TGTTCCTAAGCAGCACCCATGCAAGCACCAATAAGAATGTCACCACTGCC
AGTCGTCAGCGTAGTTTCCTGCCCCGAGTGGCCAAATTGCCAAACAGAGC
GGACAAATCGCCGAGGAAGAATCAATATCGCGAAGCTCTGACCACTGAGG
TCACGGTGGAGCAATCTCAGACGTTGCCATTGGGCAATCACAAGGCTAAA
CATTTGGTGAATACACCACATGACAGCGAGAGCAGCATTCTGCAGGACGG
CAGTGATGATAAGCTAATAAGCGACAGCGGCAGCTCAATGGATCACGACA
AGATCAAATTGGCCAAGGCCATACGCCTGCCGGATGAGGGGAACAAGAGT
TTCGTCTATGTATGCAAGCCGGTGAAGAAGGTCAAAGCTCTGTTGACTGC
CAGAAAATTGCGCGCTAGCAGCGAGCACTTGAATGGCCCAAAGGATGGTG
AGTTTAGCTTGCAGGAACAGGAGACATTCAAGCTGCAGAGGACCATTTCC
GAGGAGGCTCTATGCAGCCGTGGCGCCGGCGAGGGATACACACTCTCGCC
CGTCGAGGGACTGGCACAGAGCACATCGACCACCTCCAGCCAGTTGGATA
GTCCCACATTGGCGGCCATGCTGCAGCGCCAGCAGCAATTCGAGTCGAAG
GCGGTTGGCAGTCAGGACCGTTTGAGGTTGCAATTGGAGGAGGTGTGCCA
CAGGCACAATAATCAGCGCCAGCTGGAAAAGGATCAGTACGAGAAGGAGC
AGCGCCAATTGGAATTGGATCAGGTGTCAAAGAAACTGCCCGTGCTGCAG
CATGAGATACATATGCTGCATAAGGTGAGCGAAAAACTGGAGGCGACACT
AAGGGCCACCAATATACCCAAGCCGAGAAGCAACGTAATCATTACGGATA
TAAGCCGGCAATCATCTGGACGTTTCTACACACCGCGCACCAGTCCCAAT
CAATTGGACGAGCTGCCCATTAGGAAATTGTGTTGTTTGCGCTTGGAATA
TATACCAGCTATTGAGATGCGGGCACGCATCATTGGCACCGTTTGCCATG
TGGGCTTTGTCCAAGAGTTTCGCATCGAGACCAAAACACTTAACGAGCTA
AAGACGGCGGATGAGTCGCAATGCTTCTATTTACCGGCACCCAAAGAGGA
ACCGCCATTGGTCCAGCTCAACGAGGATGATCCATTGCAGTGCACCAACT
TTCGTCAGTTGCGTAAGAATCCGAATATGCTGTTTCAGCAACTGCGAAAA
GTGCCCGGCGCTGGGGGATCCTTTAATCTTTTGGATCAGGACACAATGTT
CTTCAATAGTCTGGCCTATGCGGATTCAAAAATCATGGATGCTAACACCG
TCGAACAGCTTGAGGTGGCCACACGCGAGGCGGGTGGCGGTGGAGCAACT
ATGGCCCATTATGGCGGAGCCATTGCCTATTCACGCCTCTCGGTGCGTCT
CAACGAAGTGGGCGTGGATGATGCTGCTGCTGCTGCTGCTCCTCCTACTC
CTGCAGTGAAATCAGAGGAGCAGGGCGATCGTCTAACTGAATGTCCTTGT
CAGGTGAACAATACCACTCAAACGGACGTGGAATTGTCCAAGTTGGAGAA
AATTCGAGAAGCGGAAGAGGAAATTAGTTCACCAGACTTTACACCCAATC
CCAGTCCCAGGACAAGGAAGCGAATGAAAGTGGAGGAGCCGAACGGCAAA
GTGCAAGAGGAAGACGCGTTGGAATCCAATCTCGATTCGCGACCAAAGAA
GACCAGGAAAGTAATAACTCGTAGAGCGCCCGATCCACCCGTTCGTTGTG
ACGTGGAGCCCAAGGTGCGTTTGAAGTTGCTCAAAACCGTATTGGTGGGA
ATGGTCCAGATCGCTGTTATATTAGTTCTCATCATGGCCATCGGATCTCC
GGATATTATCTGCTAAAAGCTTTCTAGACCAT
BS19926.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:26:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3323-RA | 2250 | CG3323-PA | 1..2250 | 17..2266 | 11250 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:26:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3323-RA | 2628 | CG3323-RA | 146..2397 | 15..2266 | 11260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:26:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5303219..5305255 | 2266..230 | 10185 | 100 | Minus |
| X | 23542271 | X | 5305327..5305546 | 234..15 | 1085 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:26:41 has no hits.
BS19926.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:53 Download gff for
BS19926.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3323-RA | 175..2422 | 17..2264 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:01:07 Download gff for
BS19926.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3323-RA | 148..2395 | 17..2264 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:19:16 Download gff for
BS19926.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3323-RA | 148..2395 | 17..2264 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:19:16 Download gff for
BS19926.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5303221..5305254 | 231..2264 | 100 | <- | Minus |
| X | 5305331..5305544 | 17..230 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:01:07 Download gff for
BS19926.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5197254..5199287 | 231..2264 | 100 | <- | Minus |
| arm_X | 5199364..5199577 | 17..230 | 100 | | Minus |
BS19926.pep Sequence
Translation from 16 to 2265
> BS19926.pep
MNRNRINQIRQLDRGQEGLPQVIQMQGQAQVQLGGDQGNHVGNEGQATGN
QNVRRKMTYTRTEMLSRGLPTVNNSNRSARNCNTAGQDWTSQLSPRHRYA
QPPKSGIPVPPLFLSSTHASTNKNVTTASRQRSFLPRVAKLPNRADKSPR
KNQYREALTTEVTVEQSQTLPLGNHKAKHLVNTPHDSESSILQDGSDDKL
ISDSGSSMDHDKIKLAKAIRLPDEGNKSFVYVCKPVKKVKALLTARKLRA
SSEHLNGPKDGEFSLQEQETFKLQRTISEEALCSRGAGEGYTLSPVEGLA
QSTSTTSSQLDSPTLAAMLQRQQQFESKAVGSQDRLRLQLEEVCHRHNNQ
RQLEKDQYEKEQRQLELDQVSKKLPVLQHEIHMLHKVSEKLEATLRATNI
PKPRSNVIITDISRQSSGRFYTPRTSPNQLDELPIRKLCCLRLEYIPAIE
MRARIIGTVCHVGFVQEFRIETKTLNELKTADESQCFYLPAPKEEPPLVQ
LNEDDPLQCTNFRQLRKNPNMLFQQLRKVPGAGGSFNLLDQDTMFFNSLA
YADSKIMDANTVEQLEVATREAGGGGATMAHYGGAIAYSRLSVRLNEVGV
DDAAAAAAPPTPAVKSEEQGDRLTECPCQVNNTTQTDVELSKLEKIREAE
EEISSPDFTPNPSPRTRKRMKVEEPNGKVQEEDALESNLDSRPKKTRKVI
TRRAPDPPVRCDVEPKVRLKLLKTVLVGMVQIAVILVLIMAIGSPDIIC*
BS19926.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:54:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3323-PA | 749 | CG3323-PA | 1..749 | 1..749 | 3842 | 100 | Plus |
