BS19929.complete Sequence
1028 bp assembled on 2011-01-07
GenBank Submission: KX801785
> BS19929.complete
GAAGTTATCAGTCGACATGGGAAGTGATCGCACGTTAAAAAAGCAAAAGA
TGTCGGTATTACAGGAACTCAAGAAAATCACCACAATTGTGGCTGACACC
GGCGACTTTGAAGCCATCAACATCTATAAGCCCACGGATGCCACCACTAA
TCCCTCCCTCATCTTGTCCGCTTCGTCCATGGAGCGGTACCAGCCGCTGG
TCCAAAAGGCGGTGGAATACGCCAAGGGCAAGAAGGGCTCCGTGAGTGAG
CAGGTGGCCGAGGCCATGGACTACCTGTGCGTGCTGTTCGGAACGGAAAT
CCTGAAGGTTGTGCCCGGTCGCGTTTCCACCGAGATCGATGCCCGCTTGT
CCTTCGACACCAAGAAGAGCGTGGAGAAGGCCCTGAAGCTGATCGCCCTG
TACAAATCCCTGGGCGTCGACAAGGAGCGAATTCTGATCAAGCTGGCGTC
CACCTGGGAGGGCATCAAGGCGGCCGAGATCCTGGAGAACGAGCACGGTG
TGCACTGCAACCTGACGCTCCTTTTCTCGTTCGCACAGGCCGTGGCTTGC
GCCGAGGCCGGCGTGACCCTCATCTCCCCGTTCGTGGGCCGCATCCTGGA
CTGGTACGTGGCCAACACGGATACCAAGAAGTTCGAGGCGCTCAAGGACC
CGGGCGTGATCTCCGTGACGAACATCTACAACTACTACAAGAAGTTCGGC
TACAAGACCCTGGTCATGGGCGCCTCCTTCCGTAACGTGGGCGAAATCAA
GGCCCTGGCTGGCTGCGATCTGCTTACCATCAGCCCAGCGCTGCTTAAGG
AGCTGGAGAACGAGACCGAGTCGGTGGTCACCTACCTGTCCGTAAGCAAC
GCCAAGCTGCAGGACATCGAGAAGATCACCGTCGATGAGAGCCGGTTCCG
CTGGCTGCTCAACGAGGACGCCATGGCCACCGACAAACTTTCCGAGGGCA
TCAGGAAGTTCGCCGTGGATACTGTTAAGCTGGAGAATTTGATTAAGACC
TATCTTAAGTAGAAGCTTTCTAGACCAT
BS19929.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:26:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tal-RA | 996 | CG2827-PA | 1..996 | 17..1012 | 4980 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:26:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tal-RA | 1116 | CG2827-RA | 21..1017 | 17..1013 | 4985 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:26:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23941239..23942015 | 237..1013 | 3885 | 100 | Plus |
| 2R | 25286936 | 2R | 23941055..23941180 | 112..237 | 630 | 100 | Plus |
| 2R | 25286936 | 2R | 23940430..23940526 | 17..113 | 485 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:26:08 has no hits.
BS19929.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:08:41 Download gff for
BS19929.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tal-RA | 18..1013 | 17..1012 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:37:53 Download gff for
BS19929.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tal-RA | 21..1016 | 17..1012 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:41:14 Download gff for
BS19929.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tal-RA | 21..1016 | 17..1012 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:41:14 Download gff for
BS19929.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23940430..23940526 | 17..113 | 100 | -> | Plus |
| 2R | 23941057..23941180 | 114..237 | 100 | -> | Plus |
| 2R | 23941240..23942014 | 238..1012 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:37:53 Download gff for
BS19929.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19827953..19828049 | 17..113 | 100 | -> | Plus |
| arm_2R | 19828580..19828703 | 114..237 | 100 | -> | Plus |
| arm_2R | 19828763..19829537 | 238..1012 | 100 | | Plus |
BS19929.pep Sequence
Translation from 16 to 1011
> BS19929.pep
MGSDRTLKKQKMSVLQELKKITTIVADTGDFEAINIYKPTDATTNPSLIL
SASSMERYQPLVQKAVEYAKGKKGSVSEQVAEAMDYLCVLFGTEILKVVP
GRVSTEIDARLSFDTKKSVEKALKLIALYKSLGVDKERILIKLASTWEGI
KAAEILENEHGVHCNLTLLFSFAQAVACAEAGVTLISPFVGRILDWYVAN
TDTKKFEALKDPGVISVTNIYNYYKKFGYKTLVMGASFRNVGEIKALAGC
DLLTISPALLKELENETESVVTYLSVSNAKLQDIEKITVDESRFRWLLNE
DAMATDKLSEGIRKFAVDTVKLENLIKTYLK*
BS19929.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:50:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tal-PA | 331 | CG2827-PA | 1..331 | 1..331 | 1651 | 100 | Plus |
