BS19930.complete Sequence
521 bp assembled on 2011-01-07
GenBank Submission: KX803026
> BS19930.complete
GAAGTTATCAGTCGACATGGAGTTCATTAGCCATTTCTTGCGAGCGACGA
GCAGACGCACCGCCGCATTGGGTCCAATCCTGCAAAGAAATCGTAGCGAA
ATCATCCAAAAACAATCTTTGACCAATCGACAGGCATTCCGCAGATACAG
ATCCAGCTGCAGCACCATGGACACCACCGTTCACTCCGCCGGCATCGATG
AGACCCACCTGGTGCCCATGAGCGTCATCCAGCGACCCATTCCCTCCGTC
CTGGACGAGCAGAAGGTGCAATCCCTGATGGAAACCATTAAGAACGAAAC
CAGCGAAGATGAGGTGCCCCCCATCGACCTGCTGTGGATCTCGGGCAGCG
AGGGAGGCGACTACTACTTCAGCTTCGGCGGATGCCACCGGTTCGAGGCG
TACAAGCGGCTACAGCGGCCGACGATCAAGGCGAAGCTGGTGAAGTCCAC
ACTGGGCGATCTGTATCACTACATGGGCTCCAGCGCGCCCAAGTACCTGG
CCTGAAAGCTTTCTAGACCAT
BS19930.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:26:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6762-RA | 489 | CG6762-PA | 1..489 | 17..505 | 2445 | 100 | Plus |
| CG6762-RD | 459 | CG6762-PD | 99..459 | 145..505 | 1805 | 100 | Plus |
| CG6762-RC | 339 | CG6762-PC | 1..339 | 167..505 | 1695 | 100 | Plus |
| CG6762-RD | 459 | CG6762-PD | 1..100 | 17..116 | 500 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:26:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6762-RA | 984 | CG6762-RA | 149..638 | 16..505 | 2450 | 100 | Plus |
| CG6762-RC | 788 | CG6762-RC | 149..619 | 16..505 | 2130 | 96.1 | Plus |
| CG6762-RB | 921 | CG6762-RB | 362..752 | 115..505 | 1955 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:26:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17858050..17858264 | 291..505 | 1075 | 100 | Plus |
| X | 23542271 | X | 17857473..17857650 | 115..292 | 890 | 100 | Plus |
| X | 23542271 | X | 17857260..17857358 | 16..114 | 495 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:26:19 has no hits.
BS19930.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:08:42 Download gff for
BS19930.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6762-RA | 92..579 | 17..504 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:37:56 Download gff for
BS19930.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6762-RA | 150..637 | 17..504 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:41:18 Download gff for
BS19930.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6762-RA | 150..637 | 17..504 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:41:18 Download gff for
BS19930.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17857261..17857358 | 17..114 | 100 | -> | Plus |
| X | 17857473..17857650 | 115..292 | 100 | -> | Plus |
| X | 17858052..17858263 | 293..504 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:37:56 Download gff for
BS19930.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17751294..17751391 | 17..114 | 100 | -> | Plus |
| arm_X | 17751506..17751683 | 115..292 | 100 | -> | Plus |
| arm_X | 17752085..17752296 | 293..504 | 100 | | Plus |
BS19930.pep Sequence
Translation from 16 to 504
> BS19930.pep
MEFISHFLRATSRRTAALGPILQRNRSEIIQKQSLTNRQAFRRYRSSCST
MDTTVHSAGIDETHLVPMSVIQRPIPSVLDEQKVQSLMETIKNETSEDEV
PPIDLLWISGSEGGDYYFSFGGCHRFEAYKRLQRPTIKAKLVKSTLGDLY
HYMGSSAPKYLA*
BS19930.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:51:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6762-PA | 162 | CG6762-PA | 1..162 | 1..162 | 835 | 100 | Plus |
| CG6762-PD | 152 | CG6762-PD | 1..152 | 1..162 | 765 | 93.8 | Plus |
| CG6762-PC | 112 | CG6762-PC | 1..112 | 51..162 | 587 | 100 | Plus |
| CG6762-PB | 112 | CG6762-PB | 1..112 | 51..162 | 587 | 100 | Plus |
