Clone BS19935 Report

Search the DGRC for BS19935

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:199
Well:35
Vector:pDNR-Dual
Associated Gene/Transcriptasparagine-synthetase-RA
Protein status:BS19935.pep: full length peptide match
Sequenced Size:1709

Clone Sequence Records

BS19935.complete Sequence

1709 bp assembled on 2011-01-28

GenBank Submission: KX805587

> BS19935.complete
GAAGTTATCAGTCGACATGTGCGGAATTTTTGCCATATTTTCGAGGGATG
GGGAGCCGATACCCACGCAAATCCTCCATGGAAGCAAACACAGTTTAAGG
GAACTGGCCTATCGACAGAGTGGCAAGCATCGGCATCGGGGTCCAGATTC
CACGGGGGTCTATGTGAATTCCTTGGAAGGGGTGGCCATGATTCATGAAC
GCCTGCGAATCATTGGCGTGGAAATGGGCGACCAACCCTTCGTCTCTGAA
GATGGTAACCTCATCCTGGTGGCCAATGGAGAGATCTACAATTATCTGGA
GCTTTCGGCTGAGATTGCGAAAAAGCGTGGCTCCTACAACCCCATGAGCG
ATTGCCACGTGATACTGGAACTGTACCAGGATTATGGAAAGGATCTTCTG
CAATACATCACTGGAATGTTTGCTTTTGCCTTGTACGATAGGAAGACCAA
GGAAGTGCTTCTTGCCCGAGACCCCTTTGGCATTATACCCATGTATGTGG
GTGAGGATGCGTCGGGAAACCTTTGGGTGGCCTCGGAGATGAAGTGCCTG
GTGGATACCTGCTCCAAAGTGGAGACTTTCACACCTGGCGAGGCTCGTTT
CGGTAAAGTTGGTGACTTTAAAACATGCTGGCAGTTTCAGCAGTCTTGGA
TCAAGGAGGTGCCCACACAAACCTGCGAATTATCCCTACTGCGAGCCAAC
TTGGAGTTTGCCGTGCGCAGTCATCTGCAGTGCGATGTTCAAATGGGAGC
CCTGCTATCCGGCGGAGTGGATTCCAGTCTTATAGCCTCCATAGCCACGA
AGATAATGCGCGAACGGGATCCCAACTTCCGGCTGAAAACATTCTCTGTG
GGTCTAAGGGATGCACCCGACTTCCAGGCGGCCAGGAGTGTGGCCAAATA
TATAGACAGCGATCACAAGGAGATCATATTCGAGATCGACGAAGCTCTGG
ATGGCATTAGGGATATTATTTACCACCTTGAAACCTATGATGTGACCACA
GTGAGATGTAGTTTGCCCATGCTGCTACTAGCTAGATATATCAAGAGCAC
AGGCATCAAGATGATCCTCTCCGGCGAAGGAGCCGATGAGATCTTTGGAG
GGTATTTATACTTCCACAAGGCCCCAAGCTACAACGATTTCCACGAGGAG
CTGGTGAAGAGAGTGCGCCAGCTGCATTTATCCGATTGTTTGCGGGCCAA
CAAGGTGGCCATGGCCAAGGGCGTGGAGCTGCGAGTGCCCTTTCTGGACA
CGGGGTTCGTTAACCATGTGATGCAAATCCGACCGGAGGATAAGATACCC
GGACCCCTCAACAAATTCGGGGAAGTACAGCAAAAGCGATTGGAGAAGTA
TGTCCTGCGAGCTGCCTTTGCGGATAACTATCTGCCCGATGAAGTCCTCT
GGCGCCAGAAGGAGCAGTTCTCCGACGGAGTGGGCTACGATTGGATCGAC
AGCATCCGCAGGGTGGCCACCAGCCATGTCAGCGATCAAGAATTCTCCGC
AGCCGCCCTACGCTTCCCCTTTAACACGCCCACAACCAAGGAGGCCTTCT
ACTATCGCTGCATTTTCGCCGAACAATTCCCCGGAGAATCGGCGGCCCGA
ACCGTGGTCAGATGGGTGCCACGCCTCGATTGGGGCTGTCCGGAGGATCC
ATCCGGACGGGCACAGGCCGTCCACCAGGTCAACAAAAACTGAAAGCTTT
CTAGACCAT

BS19935.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:28:45
Subject Length Description Subject Range Query Range Score Percent Strand
asparagine-synthetase-RA 1677 CG33486-PA 1..1677 17..1693 8385 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:28:47
Subject Length Description Subject Range Query Range Score Percent Strand
asparagine-synthetase-RA 1856 CG33486-RA 83..1759 17..1693 8385 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:28:43
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21173200..21174876 17..1693 8385 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:28:44 has no hits.

BS19935.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:55 Download gff for BS19935.complete
Subject Subject Range Query Range Percent Splice Strand
asparagine-synthetase-RA 273..1948 17..1692 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:01:56 Download gff for BS19935.complete
Subject Subject Range Query Range Percent Splice Strand
asparagine-synthetase-RA 83..1758 17..1692 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:20:06 Download gff for BS19935.complete
Subject Subject Range Query Range Percent Splice Strand
asparagine-synthetase-RA 83..1758 17..1692 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:20:06 Download gff for BS19935.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21173200..21174875 17..1692 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:01:56 Download gff for BS19935.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21166300..21167975 17..1692 100   Plus

BS19935.pep Sequence

Translation from 16 to 1692

> BS19935.pep
MCGIFAIFSRDGEPIPTQILHGSKHSLRELAYRQSGKHRHRGPDSTGVYV
NSLEGVAMIHERLRIIGVEMGDQPFVSEDGNLILVANGEIYNYLELSAEI
AKKRGSYNPMSDCHVILELYQDYGKDLLQYITGMFAFALYDRKTKEVLLA
RDPFGIIPMYVGEDASGNLWVASEMKCLVDTCSKVETFTPGEARFGKVGD
FKTCWQFQQSWIKEVPTQTCELSLLRANLEFAVRSHLQCDVQMGALLSGG
VDSSLIASIATKIMRERDPNFRLKTFSVGLRDAPDFQAARSVAKYIDSDH
KEIIFEIDEALDGIRDIIYHLETYDVTTVRCSLPMLLLARYIKSTGIKMI
LSGEGADEIFGGYLYFHKAPSYNDFHEELVKRVRQLHLSDCLRANKVAMA
KGVELRVPFLDTGFVNHVMQIRPEDKIPGPLNKFGEVQQKRLEKYVLRAA
FADNYLPDEVLWRQKEQFSDGVGYDWIDSIRRVATSHVSDQEFSAAALRF
PFNTPTTKEAFYYRCIFAEQFPGESAARTVVRWVPRLDWGCPEDPSGRAQ
AVHQVNKN*

BS19935.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:54:13
Subject Length Description Subject Range Query Range Score Percent Strand
asparagine-synthetase-PA 558 CG33486-PA 1..558 1..558 2935 100 Plus