Clone BS19937 Report

Search the DGRC for BS19937

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:199
Well:37
Vector:pDNR-Dual
Associated Gene/TranscriptGrip128-RC
Protein status:BS19937.pep: full length peptide match
Sequenced Size:1538

Clone Sequence Records

BS19937.complete Sequence

1538 bp assembled on 2011-01-07

GenBank Submission: KX801297

> BS19937.complete
GAAGTTATCAGTCGACATGGGAATGGAGGATGATTTGCTACTCGTGGAGA
TCTTCAACAAGCTGCAATCCTGCCCACTCTACCAGCTACTGCTGGAGCAT
GCCTTGGAGTCTGGCGAAACGCAAGATTTGCTATGTAGTGTAAATACGCT
GAGCGAAATGCTGACCAGCAACAATGAAATCCAACTGCCGTCGCTGCACG
ATGAGCTGTTCACGCAGTTCTTTGCGCAGCTAAAGGTTTACTGTGGTGCG
GACAACACGGATTACGAGGATGAGCCGGAGCCGGACAAAGACTACGAAGA
TCTGACTGTGTGCAATAGGCAGGGCATTAGGAACCATGAACTTTTCGCCA
TATTTACCCAGCCGTTGGTGGAACAACGTTTGGAGCGACAACGTGAGCGG
CTTAAAAGCAACCCCGTTCTAATGGCCAACATTTTGAAGCGCTTGGAGCG
CTCCACATGTCTGCAGCTGAAGTCTGAGTTGCCGGAGGCACTGCGCGAAA
TACTGCGAAGGAGACAGTGGCTGGCGAACGAGTACGCGATTCGAGCGTAC
TGCAAGGAAACGCAGGTGGCCGAGAAGATGCGATTCCTGCGGCATACGAT
GCTGCTGGAGAAATACTACCTATTTGTGCCATACTACAACGCACTCTTCG
TGCGCATGGAGAAAAACAATAGCTGGGCACTGGGTTCGGTGCTCACTTCT
AAGCTATGCGCTGTGCTCCTTCCGCATTATCCGCAATTGGCTCATTATCT
TCATGTCAAGTTAATATCCCAGATAAACTCGAATTCAATCAAGGTCTATG
AGGCCCTGGAGGCTATTGAACTGGACTTCGAGCGGCCAATGGCCATGCAC
CAGTGGTACATTCTCACACCCGCGCACATGCAAGACTACAATTCGGTGTG
GCGTCTGATGCTGAAGGTGAAGTGGGCCGTCTGGAAGCTGGAGAATATGC
AGTTTTTGCGTCGCGCTAGGTTCAATCCCTGCGCACCACTGGATTTGATC
GGTCTGACCATTCGTCGCCTGGAGATTGTGCGCTTCTGGTTAATTTTCCT
CATCAACAACCTGCACGCGCACATTATGGAGGCCGTGAGCCGGCAGTTCG
AGCTCAGGATTGGCGAGTGCAAGAATGTCCGCGAGTTGCGTATCATGCAC
GACGAGCACCTGGCGTGGCTGAAGACACACTGTATGCTGACCGACGAATT
TAAGGCATTCCGCGTCGCCCTCGACCAGATCTTTCATCTGGTCTACGTGC
TGGACATGGAGTGGACCACCTGCGCCAGCTGCATGCACGACCACGATGCC
CTATGCTTGGACGTCACCATTTCGGATGACGGCATTGATGACAGCGAAAC
GCAACGTCGTAGCTTGGAGTACCTGGCGCTCAACCAGGTGGCGGAGATCG
AGTTAACGTACATACGTTGCCACCAGATGCTGGCCGACATCCTTAACACG
CTGGTGCACCAGAACGATCACGGATTCCTGTCTGCCTTGGAGGAGACCAT
CAACTCCAGTGTGCCCCATTAGAAGCTTTCTAGACCAT

BS19937.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:27:01
Subject Length Description Subject Range Query Range Score Percent Strand
Grip128-RB 3279 CG9201-PB 1774..3279 17..1522 7530 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:27:03
Subject Length Description Subject Range Query Range Score Percent Strand
Grip128-RB 3484 CG9201-RB 1854..3361 17..1524 7540 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:26:58
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15468514..15469975 1478..17 7310 100 Minus
X 23542271 X 15468404..15468449 1524..1479 230 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:26:59 has no hits.

BS19937.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:08:45 Download gff for BS19937.complete
Subject Subject Range Query Range Percent Splice Strand
Grip128-RC 1994..3499 17..1522 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:38:05 Download gff for BS19937.complete
Subject Subject Range Query Range Percent Splice Strand
Grip128-RB 1854..3359 17..1522 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:41:35 Download gff for BS19937.complete
Subject Subject Range Query Range Percent Splice Strand
Grip128-RB 1854..3359 17..1522 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:41:35 Download gff for BS19937.complete
Subject Subject Range Query Range Percent Splice Strand
X 15468406..15468449 1479..1522 100 <- Minus
X 15468514..15469975 17..1478 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:38:05 Download gff for BS19937.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 15362439..15362482 1479..1522 100 <- Minus
arm_X 15362547..15364008 17..1478 100   Minus

BS19937.pep Sequence

Translation from 16 to 1521

> BS19937.pep
MGMEDDLLLVEIFNKLQSCPLYQLLLEHALESGETQDLLCSVNTLSEMLT
SNNEIQLPSLHDELFTQFFAQLKVYCGADNTDYEDEPEPDKDYEDLTVCN
RQGIRNHELFAIFTQPLVEQRLERQRERLKSNPVLMANILKRLERSTCLQ
LKSELPEALREILRRRQWLANEYAIRAYCKETQVAEKMRFLRHTMLLEKY
YLFVPYYNALFVRMEKNNSWALGSVLTSKLCAVLLPHYPQLAHYLHVKLI
SQINSNSIKVYEALEAIELDFERPMAMHQWYILTPAHMQDYNSVWRLMLK
VKWAVWKLENMQFLRRARFNPCAPLDLIGLTIRRLEIVRFWLIFLINNLH
AHIMEAVSRQFELRIGECKNVRELRIMHDEHLAWLKTHCMLTDEFKAFRV
ALDQIFHLVYVLDMEWTTCASCMHDHDALCLDVTISDDGIDDSETQRRSL
EYLALNQVAEIELTYIRCHQMLADILNTLVHQNDHGFLSALEETINSSVP
H*

BS19937.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:51:09
Subject Length Description Subject Range Query Range Score Percent Strand
Grip128-PB 1092 CG9201-PB 592..1092 1..501 2637 100 Plus