Clone BS19951 Report

Search the DGRC for BS19951

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:199
Well:51
Vector:pDNR-Dual
Associated Gene/TranscriptCG34450-RA
Protein status:BS19951.pep: full length peptide match
Sequenced Size:1160

Clone Sequence Records

BS19951.complete Sequence

1160 bp assembled on 2011-01-07

GenBank Submission: KX806455

> BS19951.complete
GAAGTTATCAGTCGACATGGACAAGGCACCGGGTCAGGACTCAAATCACA
GAAAATCTCTGAATCTGCTGGACAAAGCGCTGCCCATATCGGTGGTCACC
GCACCACAGTTGCGATCTCGCCGCCAATTCAGTTTCAATGGCCTGCGGTA
CGAGATGAATGGGCTGCTACCATTGCCGCCACCGCCGGCCACGCCGCAGG
TGCAGCTCTCGAGGCTCAGTGCAGGTGGCGGAGGTGGTGGCTCCCAGGTG
AAGAAGCAGGCTAGTGGCTCCAGCCATTCGCTGAATGCCAAAACTATTGC
TGAGACAGCCGGCGGAGATGGTGGTGCATCACGGCCGGATCGAAAGGGAG
TCTTGCCCAAGCATGTGACATTGGGTGACCGAGCCTTGCTGATGAACGGA
GGGGTGCGCATGCCCAGGAGCAGCGAGCTGGACTTCCCGAAAACAAAACC
CACAGCGAAAAGGTCATCCTCTCAATTTTCCATCAAAGCAGAAAAGCAGG
ACAAGAAGGTGGAGCGTAAGGATGCTTCGGGACTTATCCAGGATAGAGAA
GCCCTCAGACGAGAGAAGAAGCATCGACGCAGGCCGCATTCAATGGAATT
GCAGGAGAGGATGTCCTCACCGGATCAGTGTGACCTGACCGCTCAGCAGA
GCTGGATGTTGGCCCAGACGCTGCTTAAGGCCTACGGAAGCGGACTGGTC
CAAACTTCCACCGGTGACGGAGCTTCCTCCAAAATGGACTACATTACTCT
GGCCGGATTGGTACTCGGCTGCGTGGTCTCCCACGCCCTCTTCTTCCTGT
GCTGGTACTTCAGTTGGCTAAAGAACCAGGCGATCGGGCTACGAAAACGC
TTTCTGGGCAACGCCAATCTCTGGGAGTTCTTCGACTTAGAGGACACCAC
CCGGTACTCAGTGCAGACCAAACTGGTAATGGCGCCGCTGATCCTCCTGT
GCGGTCTGCTCTACTGTGTGGTCAATCTGCTGCACCTGGTGGTGCAGGTG
GTGCGATCGGATGTGCCGCGCACAGTGGTTGTGTTTGTCCAGCGGGTGGC
GAACAGTGGACTCCTGGGCACCATTACCATGGGACTGGCCGGTGGCGGAG
GCAATGCAGACATTCGAGGACGCCACAATCAAGTGATGCGATAAAAGCTT
TCTAGACCAT

BS19951.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:22:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG34450-RA 1128 CG34450-PA 1..1128 17..1144 5640 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:22:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG34450-RA 1472 CG34450-RA 255..1383 16..1144 5645 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:22:15
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9329105..9330233 1144..16 5645 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:22:16 has no hits.

BS19951.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:08:28 Download gff for BS19951.complete
Subject Subject Range Query Range Percent Splice Strand
CG34450-RA 90..1215 17..1142 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:37:06 Download gff for BS19951.complete
Subject Subject Range Query Range Percent Splice Strand
CG34450-RA 256..1381 17..1142 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:39:45 Download gff for BS19951.complete
Subject Subject Range Query Range Percent Splice Strand
CG34450-RA 256..1381 17..1142 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:39:45 Download gff for BS19951.complete
Subject Subject Range Query Range Percent Splice Strand
X 9329107..9330232 17..1142 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:37:06 Download gff for BS19951.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 9223140..9224265 17..1142 100   Minus

BS19951.pep Sequence

Translation from 16 to 1143

> BS19951.pep
MDKAPGQDSNHRKSLNLLDKALPISVVTAPQLRSRRQFSFNGLRYEMNGL
LPLPPPPATPQVQLSRLSAGGGGGGSQVKKQASGSSHSLNAKTIAETAGG
DGGASRPDRKGVLPKHVTLGDRALLMNGGVRMPRSSELDFPKTKPTAKRS
SSQFSIKAEKQDKKVERKDASGLIQDREALRREKKHRRRPHSMELQERMS
SPDQCDLTAQQSWMLAQTLLKAYGSGLVQTSTGDGASSKMDYITLAGLVL
GCVVSHALFFLCWYFSWLKNQAIGLRKRFLGNANLWEFFDLEDTTRYSVQ
TKLVMAPLILLCGLLYCVVNLLHLVVQVVRSDVPRTVVVFVQRVANSGLL
GTITMGLAGGGGNADIRGRHNQVMR*

BS19951.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:50:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG34450-PA 375 CG34450-PA 1..375 1..375 1926 100 Plus