BS19962.complete Sequence
1595 bp assembled on 2011-01-07
GenBank Submission: KX802781
> BS19962.complete
GAAGTTATCAGTCGACATGGTGTACTCCACGAACATCCTGCTGGCGATAG
TGACGATCCTGACGGGCGTGTTCATCTGGTCCCGGCGCACCTACGTCTAC
TGGCAGCGCCGGCGGGTGAAGTTCGTCCAGCCGACCCACCTGCTGGGCAA
CCTGAGCCGGGTGCTCCGACTGGAGGAGTCCTTTGCTCTCCAGTTGCGCC
GCTTCTACTTCGACGAGCGGTTTCGCAACGAGCCCGTCGTGGGTATCTAT
CTGTTCCACCAGCCAGCCCTGCTTATCCGCGATCTCCAGCTGGTCCGCAC
CGTTCTGGTTGAGGATTTCGTCAGCTTCTCCAACCGATTCGCCAAGTGCG
ACGGGCGCAGCGATAAAATGGGCGCCTTATCGCTATTTTTGGCCAAACAA
CCCGAATGGCGCGAGATCCGCACCCGTTTAGCACCAGCCTTCGCTGGCGC
CAAGCTGAAACAGATGTTCTCGCTGATGGAGGAGATCGGCTGCGACTTGG
AGTGGTATCTGAAGCGTCTGACTCGAGATCTTAGACGCGGCGACGCGGAG
CGAGGGGCGATTGTGAGCATCAAGGACGTGTGTGATCTGTACAACACCGA
CATGATAGCCAGCATCGCATTCGGACTGAGATCGTACAGCCTGAGGAACA
CGCAATCGGAGATCGGCTCACATTGTCAGGACCTGTTTCGGCCGAATGTG
CGTCGAATAATCGACTTGTTTGTGATCTTTTACCTGCCAAAACTGGTGCC
GCTGCTGCGGCCCAAACTTTTCACGGAGCCGCATGCGGAATTCCTGCGCC
GAGTCATCCAGCTGGTGATCGAGGAGCGGGAGCGTGGCGGTGATCTGCGC
AACGATCTCATCGAGATGCTGCTGACGCTCAAGAAGGAGGCGGATCTGCA
GCAGGACAAGTCGCACTTCACGCACCATCGGGACTTCTTGGCCGCTCAGG
CGGCATCCTTTGAGGTGGCCGGCATTGAGACCTGCTCGGCGAGCATGTCC
TTCGCCCTCTACGAGTTGGCCAAACAACCCCTGATGCAGTCGCGCCTGCG
CCGCGAAATACGTGAGGCTTTCGCCAGCAATCCCAATGGGAGGCTCACCT
ACGAGGCCGTCGCCCGCATGGAGTTTCTCGACATGGTCGTGGAGGAGACT
CTGCGCAAGTATCCAATTGTGCCACTCTTGGAGCGCGAGTGCACGCCGAT
TAACAAGAAGCGCTTCTACTCGCTGAGGCCACACGCCGAGTGCTACACCC
GCCGTGGGATGCCCGTGTTCATATCCAATCTGGCCATACATCACGATCCT
AAGTACTGGCCGGACCCGGACCGATTCGACCCGGAGCGCTTTAGTGCGGC
AAACAAGGCGCTGCAGGCGCCCATGTCCTACATGCCCTTTGGGGCGGGGC
CGCGCAATTGCATCGGGATGCAAATCGGACTGCTGCAGATAAAGCTGGGC
CTCGTTTACTTCTTGCACCAACATCGCGTCGAGATTTGCGACCGCACCGT
GGAGCGGATTCAATTCGACGCCAAGTTCGCGCTGCTAGCCAGTGAGCAAC
GCATATACCTCAAGGTCGACTGCTTATAGAAGCTTTCTAGACCAT
BS19962.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:23:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6v1-RC | 1563 | CG1829-PC | 1..1563 | 17..1579 | 7800 | 99.9 | Plus |
| Cyp6v1-RB | 1563 | CG1829-PB | 1..1563 | 17..1579 | 7800 | 99.9 | Plus |
| Cyp6v1-RA | 1563 | CG1829-PA | 1..1563 | 17..1579 | 7800 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:23:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6v1-RC | 2528 | CG1829-RC | 823..2389 | 13..1579 | 7805 | 99.9 | Plus |
| Cyp6v1-RB | 2800 | CG1829-RB | 1062..2628 | 13..1579 | 7805 | 99.9 | Plus |
| Cyp6v1-RA | 2993 | CG1829-RA | 1288..2854 | 13..1579 | 7805 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:23:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20659823..20660643 | 483..1303 | 4105 | 100 | Plus |
| X | 23542271 | X | 20658409..20658880 | 13..484 | 2345 | 99.8 | Plus |
| X | 23542271 | X | 20660976..20661253 | 1302..1579 | 1375 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:23:07 has no hits.
BS19962.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:08:30 Download gff for
BS19962.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6v1-RA | 630..2192 | 17..1579 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:37:14 Download gff for
BS19962.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6v1-RA | 630..2192 | 17..1579 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:40:05 Download gff for
BS19962.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6v1-RA | 1292..2854 | 17..1579 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:40:05 Download gff for
BS19962.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20660978..20661253 | 1304..1579 | 99 | | Plus |
| X | 20658413..20658880 | 17..484 | 100 | -> | Plus |
| X | 20659825..20660643 | 485..1303 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:37:14 Download gff for
BS19962.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20530852..20531670 | 485..1303 | 100 | -> | Plus |
| arm_X | 20529440..20529907 | 17..484 | 100 | -> | Plus |
| arm_X | 20532005..20532280 | 1304..1579 | 99 | | Plus |
BS19962.pep Sequence
Translation from 16 to 1578
> BS19962.pep
MVYSTNILLAIVTILTGVFIWSRRTYVYWQRRRVKFVQPTHLLGNLSRVL
RLEESFALQLRRFYFDERFRNEPVVGIYLFHQPALLIRDLQLVRTVLVED
FVSFSNRFAKCDGRSDKMGALSLFLAKQPEWREIRTRLAPAFAGAKLKQM
FSLMEEIGCDLEWYLKRLTRDLRRGDAERGAIVSIKDVCDLYNTDMIASI
AFGLRSYSLRNTQSEIGSHCQDLFRPNVRRIIDLFVIFYLPKLVPLLRPK
LFTEPHAEFLRRVIQLVIEERERGGDLRNDLIEMLLTLKKEADLQQDKSH
FTHHRDFLAAQAASFEVAGIETCSASMSFALYELAKQPLMQSRLRREIRE
AFASNPNGRLTYEAVARMEFLDMVVEETLRKYPIVPLLERECTPINKKRF
YSLRPHAECYTRRGMPVFISNLAIHHDPKYWPDPDRFDPERFSAANKALQ
APMSYMPFGAGPRNCIGMQIGLLQIKLGLVYFLHQHRVEICDRTVERIQF
DAKFALLASEQRIYLKVDCL*
BS19962.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:50:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6v1-PC | 520 | CG1829-PC | 1..520 | 1..520 | 2692 | 100 | Plus |
| Cyp6v1-PB | 520 | CG1829-PB | 1..520 | 1..520 | 2692 | 100 | Plus |
| Cyp6v1-PA | 520 | CG1829-PA | 1..520 | 1..520 | 2692 | 100 | Plus |
| Cyp6g1-PB | 524 | CG8453-PB | 4..510 | 5..517 | 1205 | 45.3 | Plus |
| Cyp6g1-PA | 524 | CG8453-PA | 4..510 | 5..517 | 1205 | 45.3 | Plus |
