BS19987.complete Sequence
350 bp assembled on 2011-01-07
GenBank Submission: KX803012
> BS19987.complete
GAAGTTATCAGTCGACATGTCTCTCGTGGATAAATTAAACTATTACAGCA
CACGAAAATCGTTCAAATATGGCATACCCTTCCTCATCATGATGGTGGCT
GGCTCCTTTGGACTGCAGCAGTTCTCCAACCTCAGGTATCAGTACGCCAA
GAAGCAGCCGGTAACGCCGGAGGAGATGAAAAAGTACGGCGTAAGCATGA
AAAACCGCAAGGATGTGACGTTGGAGTCGGAGTACGACAAAGTCAAGTCC
GTGGACATAGAGAACTGGGAGAACAAACGCGGTCCACGTCCCTGGGAGGA
GCAGGAAGATCAGCCGACGACAGCGAAGCACTAGAAGCTTTCTAGACCAT
BS19987.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:24:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(3)neo43-RC | 246 | CG14865-PC | 1..246 | 89..334 | 1230 | 100 | Plus |
l(3)neo43-RB | 246 | CG14865-PB | 1..246 | 89..334 | 1230 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:24:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(3)neo43-RC | 627 | CG14865-RC | 48..366 | 17..335 | 1595 | 100 | Plus |
l(3)neo43-RB | 460 | CG14865-RB | 48..366 | 17..335 | 1595 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:24:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15278242..15278444 | 335..133 | 1015 | 100 | Minus |
3R | 32079331 | 3R | 15278502..15278621 | 136..17 | 600 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:24:40 has no hits.
BS19987.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:08:37 Download gff for
BS19987.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(3)neo43-RB | 9..326 | 17..334 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:37:40 Download gff for
BS19987.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(3)neo43-RB | 9..326 | 17..334 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:40:43 Download gff for
BS19987.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(3)neo43-RB | 48..365 | 17..334 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:40:43 Download gff for
BS19987.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15278243..15278443 | 134..334 | 100 | -> | Minus |
3R | 15278502..15278621 | 17..133 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:37:40 Download gff for
BS19987.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11103965..11104165 | 134..334 | 100 | -> | Minus |
arm_3R | 11104224..11104343 | 17..133 | 97 | | Minus |
BS19987.pep Sequence
Translation from 16 to 333
> BS19987.pep
MSLVDKLNYYSTRKSFKYGIPFLIMMVAGSFGLQQFSNLRYQYAKKQPVT
PEEMKKYGVSMKNRKDVTLESEYDKVKSVDIENWENKRGPRPWEEQEDQP
TTAKH*
BS19987.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:50:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(3)neo43-PC | 81 | CG14865-PC | 1..81 | 25..105 | 434 | 100 | Plus |
l(3)neo43-PB | 81 | CG14865-PB | 1..81 | 25..105 | 434 | 100 | Plus |