Clone BS19989 Report

Search the DGRC for BS19989

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:199
Well:89
Vector:pDNR-Dual
Associated Gene/TranscriptCG34434-RB
Protein status:BS19989.pep: full length peptide match
Sequenced Size:1415

Clone Sequence Records

BS19989.complete Sequence

1415 bp assembled on 2011-01-07

GenBank Submission: KX800218

> BS19989.complete
GAAGTTATCAGTCGACATGGCAAACGATTCGGATAGAAACGATGGCCGGG
AGAATGGCAAGAAGAACAACAAGAACAATAAGAAGAACAACAAGAAGAAG
AACGGAATGCTGAAGCCGCTTGGTAAGAAGACCGAGAAGATTGAGAAGAA
AATGAAGGAGATCAAGTGCCACAAGGCGCACTTTAACGAAATGACCGACT
GCTTGCATAAGCTTTTGACTCCAGTGACGCCCAGTAGCATGACCAAGAAC
ACAAACGTCGAGAATCCCAATAATCTGGAAGAAATGGACGACGGTAATGC
TGCTGACTCTGTCGTCGCCATGGACGAGGGCCAAGATGATGCTGCTACTG
GTGGAGATGGTGCTGCAGTTCCATGCGCTGGTGCTGCAATTGGTCGTGAT
TGGAATGCAGTTGCAGGTGTTGGTACTGGTGCTGGTACTGGAGGAGATTG
GGTTGCAGGTGCTGAAGCTGCTACTGGAGGAGATGGTGCTGCAGTTGCTG
TTGTTGGTGCTGCAACTGATGGAGATGGTGCTCCATTTGCAGGTGCTAAT
GCTGGTGAAGATTTGGCTGCAGTTGCAGGTGCTGGTGCTGGTGCTGCTAC
TGGAGGAGATGATGCTGGAGTTGCACGTGCTGTTCCTGCTACTGATGGAA
ATGGTGCTCCAGATGGTGTTCCAGTTGCAGGAGCTGTTCTTGCTACTGAT
GGAAATGGTGCTCCAGTTGCAGGTGCTACTGATGGAAATGGTGCTCCAGT
TGCAGGAGCTGTTCCTGCTGCTGATGGAAATGGTGCTCCAGTTGCAGGTG
CTATTGATGGAAATGGTGCTCCAGTTGCAGGAGCTGTTCCTGCTGCTGAT
GGAAATGGTGCTCCAGTTGCAGGTGCTTTTCCTGCTACTGATGGAAATGG
TGCTCCAGTTGCAGGTGCTTTTCCTGCTACTGATGGAAATGGTGCTCCAG
TTGCAGGTGCTTTTCCTGATACTGTTGGAGATGGTGCTCCAGTTGCTGTT
GCTGGTGCTGCTACTGATGGTGGTGGTGGCGGTGAAGGTCCTAGCACCTC
AGCTGCTGCTCCTGGTAACATCCAGCTGGATGTGCAAACTTATACGCATT
CCTTGTCATTCGTGCAACAGCAGGATGGCTCGCACGAGGTGTACACCTCT
TGCGACCTGGTTACCGATGAGGAACAGATGGCGCCCATGCGCGAGATACG
CGTCGAGGATGGCGAACTTGTGATTTTAGCCGGCGATGATGGGGTGTACC
ATCGTCCCGATGACGCTGTGATTCTCGAGGCCGAGGATGATCGTATCTAC
GTTGTCGGTGCTTTGGAGCGTAATGTTAGATACGTCCACGCCGAGGTCGT
TCAAGAGGGGAACGAGGATATGGCCCAGGACCCACCGGTCGAGGATTAGA
AGCTTTCTAGACCAT

BS19989.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:25:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG34434-RB 1383 CG34434-PB 1..1383 17..1399 6915 100 Plus
CG34434-RB 1383 CG34434-PB 647..920 738..1020 1005 91.2 Plus
CG34434-RB 1383 CG34434-PB 722..1004 663..936 1005 91.2 Plus
CG34434-RB 1383 CG34434-PB 675..970 724..1028 760 85 Plus
CG34434-RB 1383 CG34434-PB 708..1012 691..986 760 85 Plus
CG34434-RB 1383 CG34434-PB 321..878 463..1020 560 75.1 Plus
CG34434-RB 1383 CG34434-PB 447..1004 337..894 560 75.1 Plus
CG34434-RB 1383 CG34434-PB 647..786 855..1003 395 85.9 Plus
CG34434-RB 1383 CG34434-PB 839..987 663..802 395 85.9 Plus
CG34434-RB 1383 CG34434-PB 453..761 724..1020 355 77 Plus
CG34434-RB 1383 CG34434-PB 708..1004 469..777 355 77 Plus
CG34434-RB 1383 CG34434-PB 453..654 799..1000 275 75.7 Plus
CG34434-RB 1383 CG34434-PB 783..984 469..670 275 75.7 Plus
CG34434-RB 1383 CG34434-PB 789..934 517..662 265 78.8 Plus
CG34434-RB 1383 CG34434-PB 501..646 805..950 265 78.8 Plus
CG34434-RB 1383 CG34434-PB 436..632 824..1020 235 74.6 Plus
CG34434-RB 1383 CG34434-PB 808..1004 452..648 235 74.6 Plus
CG34434-RB 1383 CG34434-PB 436..586 866..1016 230 76.8 Plus
CG34434-RB 1383 CG34434-PB 850..1000 452..602 230 76.8 Plus
CG34434-RB 1383 CG34434-PB 436..514 950..1028 215 84.8 Plus
CG34434-RB 1383 CG34434-PB 934..1012 452..530 215 84.8 Plus
CG34434-RB 1383 CG34434-PB 579..646 799..866 190 85.3 Plus
CG34434-RB 1383 CG34434-PB 783..850 595..662 190 85.3 Plus
CG34434-RB 1383 CG34434-PB 892..994 452..554 185 78.6 Plus
CG34434-RB 1383 CG34434-PB 436..538 908..1010 185 78.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:25:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG34434-RB 1691 CG34434-RB 205..1587 17..1399 6915 100 Plus
CG34434-RB 1691 CG34434-RB 851..1124 738..1020 1005 91.2 Plus
CG34434-RB 1691 CG34434-RB 926..1208 663..936 1005 91.2 Plus
CG34434-RB 1691 CG34434-RB 879..1174 724..1028 760 85 Plus
CG34434-RB 1691 CG34434-RB 912..1216 691..986 760 85 Plus
CG34434-RB 1691 CG34434-RB 525..1082 463..1020 560 75.1 Plus
CG34434-RB 1691 CG34434-RB 651..1208 337..894 560 75.1 Plus
CG34434-RB 1691 CG34434-RB 851..990 855..1003 395 85.9 Plus
CG34434-RB 1691 CG34434-RB 1043..1191 663..802 395 85.9 Plus
CG34434-RB 1691 CG34434-RB 657..965 724..1020 355 77 Plus
CG34434-RB 1691 CG34434-RB 912..1208 469..777 355 77 Plus
CG34434-RB 1691 CG34434-RB 657..858 799..1000 275 75.7 Plus
CG34434-RB 1691 CG34434-RB 987..1188 469..670 275 75.7 Plus
CG34434-RB 1691 CG34434-RB 705..850 805..950 265 78.8 Plus
CG34434-RB 1691 CG34434-RB 993..1138 517..662 265 78.8 Plus
CG34434-RB 1691 CG34434-RB 640..836 824..1020 235 74.6 Plus
CG34434-RB 1691 CG34434-RB 1012..1208 452..648 235 74.6 Plus
CG34434-RB 1691 CG34434-RB 640..790 866..1016 230 76.8 Plus
CG34434-RB 1691 CG34434-RB 1054..1204 452..602 230 76.8 Plus
CG34434-RB 1691 CG34434-RB 640..718 950..1028 215 84.8 Plus
CG34434-RB 1691 CG34434-RB 1138..1216 452..530 215 84.8 Plus
CG34434-RB 1691 CG34434-RB 783..850 799..866 190 85.3 Plus
CG34434-RB 1691 CG34434-RB 987..1054 595..662 190 85.3 Plus
CG34434-RB 1691 CG34434-RB 640..742 908..1010 185 78.6 Plus
CG34434-RB 1691 CG34434-RB 1096..1198 452..554 185 78.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:24:59
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 5614658..5615804 1399..253 5735 100 Minus
X 23542271 X 5615931..5616166 252..17 1180 100 Minus
X 23542271 X 5615037..5615319 936..663 1005 91.2 Minus
X 23542271 X 5615121..5615394 1020..738 1005 91.2 Minus
X 23542271 X 5615029..5615333 986..691 760 85 Minus
X 23542271 X 5615071..5615366 1028..724 760 85 Minus
X 23542271 X 5615037..5615594 894..337 560 75.1 Minus
X 23542271 X 5615163..5615720 1020..463 560 75.1 Minus
X 23542271 X 5615054..5615202 802..663 395 85.9 Minus
X 23542271 X 5615255..5615394 1003..855 395 85.9 Minus
X 23542271 X 5615037..5615333 777..469 355 77 Minus
X 23542271 X 5615280..5615588 1020..724 355 77 Minus
X 23542271 X 5615057..5615258 670..469 275 75.7 Minus
X 23542271 X 5615387..5615588 1000..799 275 75.7 Minus
X 23542271 X 5615107..5615252 662..517 265 78.8 Minus
X 23542271 X 5615395..5615540 950..805 265 78.8 Minus
X 23542271 X 5615409..5615605 1020..824 235 74.6 Minus
X 23542271 X 5615037..5615233 648..452 235 74.6 Minus
X 23542271 X 5615041..5615191 602..452 230 76.8 Minus
X 23542271 X 5615455..5615605 1016..866 230 76.8 Minus
X 23542271 X 5615029..5615107 530..452 215 84.8 Minus
X 23542271 X 5615527..5615605 1028..950 215 84.8 Minus
X 23542271 X 5615191..5615258 662..595 190 85.3 Minus
X 23542271 X 5615395..5615462 866..799 190 85.3 Minus
X 23542271 X 5615047..5615149 554..452 185 78.6 Minus
X 23542271 X 5615503..5615605 1010..908 185 78.6 Minus
Blast to na_te.dros performed 2014-11-26 15:25:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2300..3018 1046..331 653 58.1 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2999 996..300 607 56.4 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2317..3031 1066..358 588 56.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2940 927..296 561 58 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2832 809..299 514 58.8 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2182..2820 965..335 492 57.7 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2776 795..334 477 59.3 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2445..3031 1025..460 442 57.3 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6533..7200 1028..340 437 55.7 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6413..7119 1004..292 426 56.1 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6719..7199 1046..572 423 59 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6533..6996 806..337 389 58.4 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6719..7435 1067..363 387 55.8 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2594..3037 1011..559 372 57.3 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2449..3034 1066..502 352 55.5 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6950 574..335 352 62.5 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2544 602..359 342 63.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2514 540..338 328 64.1 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6713..6972 565..306 328 61.1 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6753..7406 1066..410 326 56.4 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2520..2989 1028..574 325 55.5 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6723..6920 532..335 315 62.1 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2552..3031 1092..610 294 54.9 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6665..6893 569..335 287 60.6 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2312..2530 513..298 277 61.1 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2748..3045 1022..727 271 56.6 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2747..2980 987..739 265 59.8 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2747..2989 945..688 256 58.9 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6819..7567 1066..351 243 53.4 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2764..2980 1027..814 224 58.2 Minus
roo 9092 roo DM_ROO 9092bp 1049..1154 532..428 185 65.1 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1517..1592 555..481 179 72.4 Minus
roo 9092 roo DM_ROO 9092bp 1002..1159 1088..939 167 60.1 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1501..1613 529..418 165 65.2 Minus
gypsy11 4428 gypsy11 GYPSY11 4428bp 906..1031 603..475 159 62.3 Minus
roo 9092 roo DM_ROO 9092bp 1071..1145 556..482 150 66.7 Minus
roo 9092 roo DM_ROO 9092bp 1071..1175 1063..958 149 61.3 Minus
Dyak\TART 8444 Dyak\TART TARTYAK 8444bp 7955..8012 1007..950 137 70.7 Minus
TART-C 11124 TART-C TARTC 11124bp 9399..9456 1007..950 137 70.7 Minus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3233..3369 624..490 130 58 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1542..1586 1034..990 126 75.6 Minus

BS19989.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:08:39 Download gff for BS19989.complete
Subject Subject Range Query Range Percent Splice Strand
CG34434-RB 205..1587 17..1399 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:37:44 Download gff for BS19989.complete
Subject Subject Range Query Range Percent Splice Strand
CG34434-RB 205..1587 17..1399 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:40:51 Download gff for BS19989.complete
Subject Subject Range Query Range Percent Splice Strand
CG34434-RB 205..1587 17..1399 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:40:51 Download gff for BS19989.complete
Subject Subject Range Query Range Percent Splice Strand
X 5614658..5615804 253..1399 100 <- Minus
X 5615931..5616166 17..252 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:37:44 Download gff for BS19989.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 5508691..5509837 253..1399 100 <- Minus
arm_X 5509964..5510199 17..252 100   Minus

BS19989.pep Sequence

Translation from 16 to 1398

> BS19989.pep
MANDSDRNDGRENGKKNNKNNKKNNKKKNGMLKPLGKKTEKIEKKMKEIK
CHKAHFNEMTDCLHKLLTPVTPSSMTKNTNVENPNNLEEMDDGNAADSVV
AMDEGQDDAATGGDGAAVPCAGAAIGRDWNAVAGVGTGAGTGGDWVAGAE
AATGGDGAAVAVVGAATDGDGAPFAGANAGEDLAAVAGAGAGAATGGDDA
GVARAVPATDGNGAPDGVPVAGAVLATDGNGAPVAGATDGNGAPVAGAVP
AADGNGAPVAGAIDGNGAPVAGAVPAADGNGAPVAGAFPATDGNGAPVAG
AFPATDGNGAPVAGAFPDTVGDGAPVAVAGAATDGGGGGEGPSTSAAAPG
NIQLDVQTYTHSLSFVQQQDGSHEVYTSCDLVTDEEQMAPMREIRVEDGE
LVILAGDDGVYHRPDDAVILEAEDDRIYVVGALERNVRYVHAEVVQEGNE
DMAQDPPVED*

BS19989.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:50:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG34434-PB 460 CG34434-PB 1..460 1..460 2406 100 Plus
Cpr47Ef-PD 601 CG13214-PD 243..467 105..350 220 32.1 Plus
Cpr47Ef-PC 612 CG13214-PC 243..468 105..350 219 32.4 Plus
Muc11A-PB 1552 CG32656-PB 555..809 93..351 218 31.5 Plus
Muc11A-PB 1552 CG32656-PB 390..655 93..351 213 31.3 Plus
Muc11A-PB 1552 CG32656-PB 742..1022 93..352 212 31.1 Plus
Muc11A-PB 1552 CG32656-PB 863..1112 93..352 209 30.8 Plus
Muc11A-PB 1552 CG32656-PB 266..556 66..351 207 29.6 Plus
Muc11A-PB 1552 CG32656-PB 621..885 93..350 205 30.4 Plus
Muc11A-PB 1552 CG32656-PB 654..934 93..352 203 30.6 Plus
Muc11A-PB 1552 CG32656-PB 456..725 93..352 202 30 Plus
Muc11A-PB 1552 CG32656-PB 489..764 93..350 200 29.7 Plus
Muc11A-PB 1552 CG32656-PB 522..786 93..350 197 29.5 Plus
CG9682-PC 463 CG9682-PC 200..462 92..363 195 31.9 Plus
Muc11A-PB 1552 CG32656-PB 841..1095 93..351 194 33.3 Plus
Muc11A-PB 1552 CG32656-PB 214..500 71..350 187 30.4 Plus
Muc11A-PB 1552 CG32656-PB 896..1149 93..350 183 30 Plus
Muc11A-PB 1552 CG32656-PB 984..1257 93..349 178 30.7 Plus
Cpr47Ef-PD 601 CG13214-PD 312..548 113..359 177 30.2 Plus
Muc11A-PB 1552 CG32656-PB 929..1190 93..349 176 32.7 Plus
Cpr47Ef-PD 601 CG13214-PD 393..592 112..340 174 31 Plus
Cpr47Ef-PD 601 CG13214-PD 226..432 131..350 173 30 Plus
Cpr47Ef-PC 612 CG13214-PC 226..432 131..350 173 30 Plus
Cpr47Ef-PD 601 CG13214-PD 274..499 105..341 172 28.9 Plus
Cpr47Ef-PC 612 CG13214-PC 312..534 113..350 172 30.7 Plus
Muc11A-PB 1552 CG32656-PB 1039..1277 93..333 172 31.6 Plus
Cpr47Ef-PC 612 CG13214-PC 389..593 112..350 166 29.3 Plus
Cpr47Ef-PC 612 CG13214-PC 331..557 112..351 165 32 Plus
Cpr47Ef-PC 612 CG13214-PC 393..603 112..340 164 28.8 Plus
Cpr47Ef-PD 601 CG13214-PD 325..582 113..350 160 28.6 Plus
Cpr47Ef-PC 612 CG13214-PC 284..515 105..350 160 28.1 Plus
Muc11A-PB 1552 CG32656-PB 1051..1277 83..308 159 29 Plus