BS19994.complete Sequence
500 bp assembled on 2011-01-07
GenBank Submission: KX801866
> BS19994.complete
GAAGTTATCAGTCGACATGTCGAATTTCAATCGCATTCTGATCGTCATTG
TTATCGGATTGGCACTAGTTCATTTTAGTGCTGTGGATGCCCAGGCCGGA
ACGGTGCACTGGAACAATGGAAATGCGGCCGGCGTTGGTGTCTATTCGAG
CGCCCAGTCCGGCGGGATGCATCCGCCGGGAAGTCTGAGTGGCCAGGATC
CGCAGTTCAGCTACGGATACGCCGGCATCGATTCGCGTGGTACCTACGGT
GGAGCGGGTGGCAATGGAGCCTACTACGTGAGCGGTACGGACGAGCACGG
TCGTCCCTTCTCCTACAACAACCAGGTGGGCCATCCCGGCCAGCCGGGCT
ACATGGGCGTACGGCCGGACCCCAACTACCCGGGTACCTATGGCTACCAG
AATGGCGGAGCAATCATCGGCAGCTCGGTGGGCGTCACCGTGACCATAGC
ACTTGGATTGGCCTTGGGCGGCATGAGATTTTGAAAGCTTTCTAGACCAT
BS19994.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:24:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12655-RA | 468 | CG12655-PA | 1..468 | 17..484 | 2325 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:24:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12655-RA | 611 | CG12655-RA | 35..504 | 15..484 | 2335 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:24:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19958500..19958915 | 484..69 | 2005 | 98.8 | Minus |
| X | 23542271 | X | 21156364..21156618 | 484..230 | 1080 | 94.9 | Minus |
| X | 23542271 | X | 19910276..19910518 | 484..230 | 1000 | 93.7 | Minus |
| X | 23542271 | X | 19915440..19915682 | 484..230 | 1000 | 93.7 | Minus |
| X | 23542271 | X | 19939151..19939393 | 484..230 | 940 | 92.2 | Minus |
| X | 23542271 | X | 19929335..19929577 | 484..230 | 925 | 91.8 | Minus |
| X | 23542271 | X | 19949033..19949171 | 484..346 | 695 | 100 | Minus |
| X | 23542271 | X | 19920594..19920732 | 484..346 | 695 | 100 | Minus |
| X | 23542271 | X | 19934451..19934589 | 484..346 | 695 | 100 | Minus |
| X | 23542271 | X | 19944303..19944441 | 484..346 | 695 | 100 | Minus |
| X | 23542271 | X | 19953768..19953906 | 484..346 | 695 | 100 | Minus |
| 3R | 32079331 | 3R | 6701328..6701436 | 435..327 | 470 | 95.4 | Minus |
| X | 23542271 | X | 19959301..19959369 | 83..15 | 345 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:24:15 has no hits.
BS19994.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:08:36 Download gff for
BS19994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12655-RA | 22..488 | 17..483 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:37:35 Download gff for
BS19994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12655-RA | 37..503 | 17..483 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:40:33 Download gff for
BS19994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12655-RA | 37..503 | 17..483 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:40:33 Download gff for
BS19994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19958501..19958900 | 84..483 | 99 | <- | Minus |
| X | 19959301..19959367 | 17..83 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:37:35 Download gff for
BS19994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19852534..19852933 | 84..483 | 99 | <- | Minus |
| arm_X | 19853334..19853400 | 17..83 | 100 | | Minus |
BS19994.pep Sequence
Translation from 16 to 483
> BS19994.pep
MSNFNRILIVIVIGLALVHFSAVDAQAGTVHWNNGNAAGVGVYSSAQSGG
MHPPGSLSGQDPQFSYGYAGIDSRGTYGGAGGNGAYYVSGTDEHGRPFSY
NNQVGHPGQPGYMGVRPDPNYPGTYGYQNGGAIIGSSVGVTVTIALGLAL
GGMRF*
BS19994.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:50:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12655-PA | 155 | CG12655-PA | 1..155 | 1..155 | 834 | 100 | Plus |
