BS20007.complete Sequence
863 bp assembled on 2011-01-07
GenBank Submission: KX802637
> BS20007.complete
GAAGTTATCAGTCGACATGAATCGCGGCCAGCTTTTAGTTTTGTGCATTT
TTGCCACTGGAATTTCCCTTTCGATGGGTTTTCCCCAGGACGATCTAATT
AAGCCGGGTAGTGACGAATCGGATGTGAGTGGCATTGGCTTCGTGACGCT
CGACGGAACGGCCAGCGAAGAGAGTGACGAAAGCGACCAAGGCAACGCGT
CCGATGATTTGATATTTTTGAGTCGCCAAAAGCCAAGTCCGGTCAACAAT
TCCGTCGATTTGAGCGCCTTTGTGGCACTGATTCCTCTGCAAGAAGTCCA
GTCCATTGCTGCTCACTATTATCATCATGATGCGGAGTTTCAAAGGTCGT
ACGCCTTTCTCGCCAGCAGCGATTTCGCGGACATCAAGCGGAAAATACTT
CAGCTGCCGGAAGTGCTGGAGTTCACCAACTATCTGGGTAACAATGGACT
AGATGTCGTCAAGGTGATGCATTCGGTGGCAGGAGTGTTCAAACCGTCCA
TTCTGAGCTCCGCAGCGGTCAACGAGCCAACAAAAGTCACAACCACCGAA
GATGGCAGCTCCGCCGCTGGAGAAGCACAAACTGGCCTCCATGGAATGGT
GGAGAGGGTCCTGGAAATTCTGCCGCAGGACCAACTGTACGCCCTATTCT
TCGACGAGTTTGAGAGCAACAAACAGTTCGCAGCATTTGTCGACAGCATT
AGCAGTCCAAAGTTTGCCAAGATTTTGAGCGGTTTGCAGAACTCAATGCC
GTTGCGAAATCTACTATTTGTCCTGCACAATAACAGTATCTATGTGGAGC
GGATTGTGGAGTCCGTAAAATCGTATCTATCCATTTCCAGTTTTTAGAAG
CTTTCTAGACCAT
BS20007.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:20:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4409-RB | 831 | CG4409-PB | 1..831 | 17..847 | 4155 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:20:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4409-RB | 939 | CG4409-RB | 40..870 | 17..847 | 4155 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:20:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16443250..16443757 | 17..524 | 2540 | 100 | Plus |
| 2R | 25286936 | 2R | 16443907..16444122 | 524..739 | 1080 | 100 | Plus |
| 2R | 25286936 | 2R | 16444666..16444776 | 737..847 | 555 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:20:19 has no hits.
BS20007.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:08:24 Download gff for
BS20007.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4409-RB | 15..845 | 17..847 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:36:51 Download gff for
BS20007.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4409-RB | 40..870 | 17..847 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:39:10 Download gff for
BS20007.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4409-RB | 40..870 | 17..847 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:39:10 Download gff for
BS20007.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16443250..16443757 | 17..524 | 100 | -> | Plus |
| 2R | 16443908..16444122 | 525..739 | 100 | -> | Plus |
| 2R | 16444669..16444776 | 740..847 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:36:51 Download gff for
BS20007.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12330755..12331262 | 17..524 | 100 | -> | Plus |
| arm_2R | 12331413..12331627 | 525..739 | 100 | -> | Plus |
| arm_2R | 12332174..12332281 | 740..847 | 100 | | Plus |
BS20007.pep Sequence
Translation from 16 to 846
> BS20007.pep
MNRGQLLVLCIFATGISLSMGFPQDDLIKPGSDESDVSGIGFVTLDGTAS
EESDESDQGNASDDLIFLSRQKPSPVNNSVDLSAFVALIPLQEVQSIAAH
YYHHDAEFQRSYAFLASSDFADIKRKILQLPEVLEFTNYLGNNGLDVVKV
MHSVAGVFKPSILSSAAVNEPTKVTTTEDGSSAAGEAQTGLHGMVERVLE
ILPQDQLYALFFDEFESNKQFAAFVDSISSPKFAKILSGLQNSMPLRNLL
FVLHNNSIYVERIVESVKSYLSISSF*
BS20007.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:49:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4409-PB | 276 | CG4409-PB | 1..276 | 1..276 | 1379 | 100 | Plus |
| CG15712-PA | 214 | CG15712-PA | 29..208 | 81..272 | 151 | 23.2 | Plus |
