BS20053.complete Sequence
1154 bp assembled on 2011-01-07
GenBank Submission: KX805926
> BS20053.complete
GAAGTTATCAGTCGACATGCGCTATAATCTGTTAGCCAGTTCGTTAAAAT
TGCTGAATAGCACGAAAACCCACAATTTGTTCTTGGTGAACGTGCGCAGC
TTGACCGGCGCCGCCCACACCAACGATGCAGTGGCTCCGACCACGCGCCC
ACCGCCCGCAGAATCGAGGAATCCCGGAGAGGAGCAACGATCACTGCACA
TCGCGGTAATTGGAGTGCCCAATGTGGGAAAGAGCACGTTCATCAACAAC
ACGGTGAACCACCGAGTGTGTCCCACCTCGGCCAAGGTGCACACCACTCG
GCAGTCGAACACGGCCATTTACACCACCGGCCAGACGCAGTTGGTCTTTT
ACGATACGCCGGGCCTGGTCACGCAACATGAGATTCGTCGGCACCACCTG
GACCAGAACTTTAAGAGTGCCTACCGCCATGCCATACAGCATGCGGACAT
CATCGCCGTGGTGCACGATGCCTCAAATGCCTGGACTAGGAAGGAACTGC
ATCCCACTGTCTTGGATACGCTGAAGGCGTATAGCAACCTGCCCAGTTTC
CTGGTGCTGAATAAGATAGACGCCCTGAAGTCGAAGCGTTTGCTGTTGGA
TCTGATCAAGACACTCACCAACGACACCTTGACAGTTGGCAAGCGGGAAG
TCCAGGCAAAAAGTGCTCTCGCCAAGGAAATAAGAATCAACAAGCGGGAG
TCTAGCTGGAGCCATTTTAGCGACGTGTTTCTTGTTTCCGCCTTGACCGG
CAATGGGCTGCAGGAGATGCAGAACTACCTGGTGGGCCAGGCTAAGCCCA
GGGATTGGAAATACCCAGCTGACATTCATACGGACTCCAGCCCAGAAGCA
TTAATTGTGGAGAGTGTGCGGGCTCGTCTGCTGGACTACTTGCCGCAGGA
GATACCCTACAACCTTAAGTGCGAGATCGAGTACTACAGTGTGGAAAAAA
ATGTTGTCTACACATCCGTGCAGGTTCAGTGCCCCACCACGCGAATCGAG
CGCCTAATCTGTGGCGAGGGTAATGGCAAGCTGCGGCAGATCACGGAGCG
AGTTACATCAGACCTGGTGGAGATGTTCGGCCAAGCAGTGTCCCTTACTA
TATCTACAGTTTCCAAGGGCAAGAAGACCGCCGCTTGAAAGCTTTCTAGA
CCAT
BS20053.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:37:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7488-RA | 1122 | CG7488-PA | 1..1122 | 17..1138 | 5610 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:37:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7488-RA | 1249 | CG7488-RA | 72..1193 | 17..1138 | 5610 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:37:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 12995691..12996624 | 17..950 | 4670 | 100 | Plus |
3R | 32079331 | 3R | 12996682..12996869 | 951..1138 | 940 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:37:38 has no hits.
BS20053.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:09:28 Download gff for
BS20053.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7488-RA | 45..1165 | 17..1137 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:40:34 Download gff for
BS20053.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7488-RA | 72..1192 | 17..1137 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:45:44 Download gff for
BS20053.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7488-RA | 72..1192 | 17..1137 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:45:44 Download gff for
BS20053.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 12995691..12996624 | 17..950 | 100 | -> | Plus |
3R | 12996682..12996868 | 951..1137 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:40:34 Download gff for
BS20053.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 8822404..8822590 | 951..1137 | 100 | | Plus |
arm_3R | 8821413..8822346 | 17..950 | 100 | -> | Plus |
BS20053.pep Sequence
Translation from 16 to 1137
> BS20053.pep
MRYNLLASSLKLLNSTKTHNLFLVNVRSLTGAAHTNDAVAPTTRPPPAES
RNPGEEQRSLHIAVIGVPNVGKSTFINNTVNHRVCPTSAKVHTTRQSNTA
IYTTGQTQLVFYDTPGLVTQHEIRRHHLDQNFKSAYRHAIQHADIIAVVH
DASNAWTRKELHPTVLDTLKAYSNLPSFLVLNKIDALKSKRLLLDLIKTL
TNDTLTVGKREVQAKSALAKEIRINKRESSWSHFSDVFLVSALTGNGLQE
MQNYLVGQAKPRDWKYPADIHTDSSPEALIVESVRARLLDYLPQEIPYNL
KCEIEYYSVEKNVVYTSVQVQCPTTRIERLICGEGNGKLRQITERVTSDL
VEMFGQAVSLTISTVSKGKKTAA*
BS20053.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:53:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7488-PA | 373 | CG7488-PA | 1..373 | 1..373 | 1910 | 100 | Plus |