BS20083.complete Sequence
434 bp assembled on 2011-01-07
GenBank Submission: KX805798
> BS20083.complete
GAAGTTATCAGTCGACATGGAGGATTGGAAATCGGAGGAAATGGCAAGGA
AAAGAAACAGGAATAGGAGCAAGCAGCGCAGACGAAGGCAGAAAAGTGAG
GGAAAGCCGAAGCCACATACATCTCGAGATCAGTGGAGCAATGTGGCTCA
AATATACCAAAGCCTTTTTGAATGGCACCACAATCATGTTATGAGTCTCT
GCCCTGAGGTTAATCCGAATCTGGATCAGGACCTTGAGGATATTCCCAAG
GAAACAGGAACGTTTCACTGCCTGGACTACGTGTACGAGAGTTCTTCCGA
GGATGAGGAGATCGAACCCATTGACGAAGGCTATCTGAAGTTCCTCGAGG
TGACCATTAAGCATCAGCAGGAACTCAGGGATCGAAGAACTGCCCAAACC
ACCGACTCTTTAGATTAGAAGCTTTCTAGACCAT
BS20083.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:27:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13689-RA | 402 | CG13689-PA | 1..402 | 17..418 | 1995 | 99.8 | Plus |
| CG13689-RB | 345 | CG13689-PB | 77..345 | 150..418 | 1330 | 99.6 | Plus |
| CG13689-RB | 345 | CG13689-PB | 1..79 | 17..95 | 395 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:27:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13689-RA | 683 | CG13689-RA | 59..462 | 17..420 | 2005 | 99.8 | Plus |
| CG13689-RB | 1494 | CG13689-RB | 135..405 | 150..420 | 1340 | 99.6 | Plus |
| CG13689-RB | 1494 | CG13689-RB | 59..137 | 17..95 | 395 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:27:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 603074..603341 | 153..420 | 1325 | 99.6 | Plus |
| 2L | 23513712 | 2L | 602871..603006 | 17..152 | 680 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:27:15 has no hits.
BS20083.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:08:46 Download gff for
BS20083.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13689-RA | 59..460 | 17..418 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:38:06 Download gff for
BS20083.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13689-RA | 59..460 | 17..418 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:41:41 Download gff for
BS20083.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13689-RA | 59..460 | 17..418 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:41:41 Download gff for
BS20083.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 602871..603006 | 17..152 | 100 | -> | Plus |
| 2L | 603074..603339 | 153..418 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:38:06 Download gff for
BS20083.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 602871..603006 | 17..152 | 100 | -> | Plus |
| arm_2L | 603074..603339 | 153..418 | 99 | | Plus |
BS20083.pep Sequence
Translation from 16 to 417
> BS20083.pep
MEDWKSEEMARKRNRNRSKQRRRRQKSEGKPKPHTSRDQWSNVAQIYQSL
FEWHHNHVMSLCPEVNPNLDQDLEDIPKETGTFHCLDYVYESSSEDEEIE
PIDEGYLKFLEVTIKHQQELRDRRTAQTTDSLD*
BS20083.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:51:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13689-PA | 133 | CG13689-PA | 1..133 | 1..133 | 719 | 100 | Plus |
| CG13689-PB | 114 | CG13689-PB | 1..114 | 1..133 | 583 | 85.7 | Plus |
