BS20103.complete Sequence
596 bp assembled on 2011-01-07
GenBank Submission: KX803990
> BS20103.complete
GAAGTTATCAGTCGACATGCCGGGAATCCTATTGCCACTGGCGCTATTGG
CCCTCGTTTCAAATGGCGCAGCCATCAGGTGTTATGTCTGCGATTCCAGT
GATAATCCCAGTTGCGCCGATCTGGGCTCGAATTCCAGCATAGTGGCGGA
GGAATGCACTTTGGACAAAATGAAATCGCTGGACACCTGGCTATTTGACT
TGAATAAGTTCTCATATTTCGATAATGGCGCCAACAAAAGTCCGCTCATG
AATTGCCAAAAAGTTGTGGCCAAAGACCCTGATACAAGGAAAGTGGTGAC
GGCGCGCTTCTGCCAACTGGACACCGGCGACTCGGATGCCTGCGAGATCC
TGCGTACCAAGCTTCGCATCCCGAGCCCCGAGGAGCGGGAGCAGCGGAAT
CGCAACCAAAACAAGCGAAGGAAGGGTCACGGCCAGGATGCGGAGGAGGA
TGACGAAATCTCCGCAGAGGATGCGTTCTTCTGCGGCATCTGTAAATCGC
ATCGCTGCAATGGTGCGGCGGCCGTAACGCTTTCCTTGGCTACGATTCTG
GCCATGATTGCGCTCCAATTGGGCTGCTAAAAGCTTTCTAGACCAT
BS20103.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:40:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14274-RA | 564 | CG14274-PA | 1..564 | 17..580 | 2820 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:40:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14274-RA | 1608 | CG14274-RA | 153..717 | 16..580 | 2825 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:40:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8340864..8341165 | 279..580 | 1510 | 100 | Plus |
2L | 23513712 | 2L | 8340182..8340314 | 150..282 | 650 | 99.2 | Plus |
2L | 23513712 | 2L | 8338579..8338666 | 65..152 | 440 | 100 | Plus |
2L | 23513712 | 2L | 8338439..8338489 | 16..66 | 255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:40:55 has no hits.
BS20103.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:30:44 Download gff for
BS20103.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14274-RA | 129..690 | 17..578 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:41:09 Download gff for
BS20103.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14274-RA | 154..715 | 17..578 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:46:53 Download gff for
BS20103.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14274-RA | 154..715 | 17..578 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:46:53 Download gff for
BS20103.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8340184..8340310 | 152..278 | 100 | -> | Plus |
2L | 8340864..8341163 | 279..578 | 100 | | Plus |
2L | 8338440..8338488 | 17..65 | 100 | -> | Plus |
2L | 8338580..8338665 | 66..151 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:41:09 Download gff for
BS20103.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8338440..8338488 | 17..65 | 100 | -> | Plus |
arm_2L | 8338580..8338665 | 66..151 | 100 | -> | Plus |
arm_2L | 8340184..8340310 | 152..278 | 100 | -> | Plus |
arm_2L | 8340864..8341163 | 279..578 | 100 | | Plus |
BS20103.pep Sequence
Translation from 16 to 579
> BS20103.pep
MPGILLPLALLALVSNGAAIRCYVCDSSDNPSCADLGSNSSIVAEECTLD
KMKSLDTWLFDLNKFSYFDNGANKSPLMNCQKVVAKDPDTRKVVTARFCQ
LDTGDSDACEILRTKLRIPSPEEREQRNRNQNKRRKGHGQDAEEDDEISA
EDAFFCGICKSHRCNGAAAVTLSLATILAMIALQLGC*
BS20103.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:56:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14274-PA | 187 | CG14274-PA | 1..187 | 1..187 | 981 | 100 | Plus |