Clone BS20103 Report

Search the DGRC for BS20103

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:201
Well:3
Vector:pDNR-Dual
Associated Gene/TranscriptCG14274-RA
Protein status:BS20103.pep: full length peptide match
Sequenced Size:596

Clone Sequence Records

BS20103.complete Sequence

596 bp assembled on 2011-01-07

GenBank Submission: KX803990

> BS20103.complete
GAAGTTATCAGTCGACATGCCGGGAATCCTATTGCCACTGGCGCTATTGG
CCCTCGTTTCAAATGGCGCAGCCATCAGGTGTTATGTCTGCGATTCCAGT
GATAATCCCAGTTGCGCCGATCTGGGCTCGAATTCCAGCATAGTGGCGGA
GGAATGCACTTTGGACAAAATGAAATCGCTGGACACCTGGCTATTTGACT
TGAATAAGTTCTCATATTTCGATAATGGCGCCAACAAAAGTCCGCTCATG
AATTGCCAAAAAGTTGTGGCCAAAGACCCTGATACAAGGAAAGTGGTGAC
GGCGCGCTTCTGCCAACTGGACACCGGCGACTCGGATGCCTGCGAGATCC
TGCGTACCAAGCTTCGCATCCCGAGCCCCGAGGAGCGGGAGCAGCGGAAT
CGCAACCAAAACAAGCGAAGGAAGGGTCACGGCCAGGATGCGGAGGAGGA
TGACGAAATCTCCGCAGAGGATGCGTTCTTCTGCGGCATCTGTAAATCGC
ATCGCTGCAATGGTGCGGCGGCCGTAACGCTTTCCTTGGCTACGATTCTG
GCCATGATTGCGCTCCAATTGGGCTGCTAAAAGCTTTCTAGACCAT

BS20103.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:40:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG14274-RA 564 CG14274-PA 1..564 17..580 2820 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:40:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG14274-RA 1608 CG14274-RA 153..717 16..580 2825 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:40:54
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8340864..8341165 279..580 1510 100 Plus
2L 23513712 2L 8340182..8340314 150..282 650 99.2 Plus
2L 23513712 2L 8338579..8338666 65..152 440 100 Plus
2L 23513712 2L 8338439..8338489 16..66 255 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:40:55 has no hits.

BS20103.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:30:44 Download gff for BS20103.complete
Subject Subject Range Query Range Percent Splice Strand
CG14274-RA 129..690 17..578 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:41:09 Download gff for BS20103.complete
Subject Subject Range Query Range Percent Splice Strand
CG14274-RA 154..715 17..578 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:46:53 Download gff for BS20103.complete
Subject Subject Range Query Range Percent Splice Strand
CG14274-RA 154..715 17..578 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:46:53 Download gff for BS20103.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8340184..8340310 152..278 100 -> Plus
2L 8340864..8341163 279..578 100   Plus
2L 8338440..8338488 17..65 100 -> Plus
2L 8338580..8338665 66..151 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:41:09 Download gff for BS20103.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8338440..8338488 17..65 100 -> Plus
arm_2L 8338580..8338665 66..151 100 -> Plus
arm_2L 8340184..8340310 152..278 100 -> Plus
arm_2L 8340864..8341163 279..578 100   Plus

BS20103.pep Sequence

Translation from 16 to 579

> BS20103.pep
MPGILLPLALLALVSNGAAIRCYVCDSSDNPSCADLGSNSSIVAEECTLD
KMKSLDTWLFDLNKFSYFDNGANKSPLMNCQKVVAKDPDTRKVVTARFCQ
LDTGDSDACEILRTKLRIPSPEEREQRNRNQNKRRKGHGQDAEEDDEISA
EDAFFCGICKSHRCNGAAAVTLSLATILAMIALQLGC*

BS20103.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:56:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG14274-PA 187 CG14274-PA 1..187 1..187 981 100 Plus