BS20104.complete Sequence
458 bp assembled on 2011-01-07
GenBank Submission: KX803079
> BS20104.complete
GAAGTTATCAGTCGACATGGATAAACTGCGAGGCAACAATGCGGCTAGCG
AGAATCCCTTCAAGCGGCCGATGAATGCCCTCCAGAAGCAGTGGTACCGC
GTCCTGCTGGCCCGCCGTGTGGGATTCGGGCAGCGTCCTCCGCCCGACGA
AAAGGAGCTAACGTACGCCGACATTTGTCGTAAGCGCTATGCGGCATCGT
TCCGGCGATACAACGAGTGTTTCCGCCGGGAAATGGCCAAACATGAGGAG
ATGCAGCGATGCGCCATCGACGCCATGAGGGTACACAGAACCTTTGCCAT
CACCACACTTTGGCTACCTTTGCACTCGAAGCGGGAAATCAACTCAACGC
TGGAAACCCTCGAAAAGGTTCTCACCGCCAAGGAAAGACGACGCCTGCAG
GAGATTCTCAAGCAGGGAGAGTCCTGGCACTCGCACCGCTAAAAGCTTTC
TAGACCAT
BS20104.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:41:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14342-RB | 426 | CG14342-PB | 1..426 | 17..442 | 2130 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:41:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14342-RB | 802 | CG14342-RB | 102..527 | 17..442 | 2130 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:41:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 1204316..1204464 | 17..165 | 745 | 100 | Plus |
2L | 23513712 | 2L | 1204565..1204687 | 166..288 | 615 | 100 | Plus |
2L | 23513712 | 2L | 1204759..1204843 | 285..369 | 425 | 100 | Plus |
2L | 23513712 | 2L | 1204899..1204975 | 366..442 | 385 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:41:06 has no hits.
BS20104.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:30:45 Download gff for
BS20104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14342-RB | 76..499 | 17..440 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:41:11 Download gff for
BS20104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14342-RB | 102..525 | 17..440 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:46:57 Download gff for
BS20104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14342-RB | 102..525 | 17..440 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:46:57 Download gff for
BS20104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1204316..1204464 | 17..165 | 100 | -> | Plus |
2L | 1204565..1204687 | 166..288 | 100 | -> | Plus |
2L | 1204763..1204841 | 289..367 | 100 | -> | Plus |
2L | 1204901..1204973 | 368..440 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:41:11 Download gff for
BS20104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 1204316..1204464 | 17..165 | 100 | -> | Plus |
arm_2L | 1204565..1204687 | 166..288 | 100 | -> | Plus |
arm_2L | 1204763..1204841 | 289..367 | 100 | -> | Plus |
arm_2L | 1204901..1204973 | 368..440 | 100 | | Plus |
BS20104.pep Sequence
Translation from 16 to 441
> BS20104.pep
MDKLRGNNAASENPFKRPMNALQKQWYRVLLARRVGFGQRPPPDEKELTY
ADICRKRYAASFRRYNECFRREMAKHEEMQRCAIDAMRVHRTFAITTLWL
PLHSKREINSTLETLEKVLTAKERRRLQEILKQGESWHSHR*
BS20104.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:56:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14342-PB | 141 | CG14342-PB | 1..141 | 1..141 | 749 | 100 | Plus |