Clone BS20106 Report

Search the DGRC for BS20106

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:201
Well:6
Vector:pDNR-Dual
Associated Gene/TranscriptCG13931-RA
Protein status:BS20106.pep: full length peptide match
Sequenced Size:551

Clone Sequence Records

BS20106.complete Sequence

551 bp assembled on 2011-01-07

GenBank Submission: KX800894

> BS20106.complete
GAAGTTATCAGTCGACATGTCCAAACTGTCATCTGGTGGTCCCTCCATGG
CGGCCAAGCTGCTGGCCATAATGCTTCTGCTGGTGGCGACGGGAGTGCAG
GCGCGGCGTCTGGGCCACCGACGCCTAATCATCCACGTGCCGGTCAAGGT
GAAGACGCACCACCACACTCACACCGTGTACAAGGTGCTACACGGATCAC
ATGGTGGCGGTGGCGGCGGAGGTGTAAAGCAAACGGTATACAAAGTGCTT
GGCTTCTCCACACACGGTGGTGGCATTGCCAAGGGCGGCGTAGGAGGAGG
AGGAGGCATTGGCCATGGAGCCCACGGTAGCTACGACATGGGCAGCATAG
GAGGAATGGGACACGGCGAAATCACATACGAGGACATGCACGGATGCGAG
AGCGGCAAAGTGATTCCGGCGGCCAGAGACATGATTTTCAATCACTACTC
GCGTCACGGCCAAAGCGATGGAACTGCCGAGGATTACGCCGAGGAGCTGG
ACGACTTTGTAGACCTAAGGGATGGCTGGTTGTGAAAGCTTTCTAGACCA
T

BS20106.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:41:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG13931-RB 519 CG13931-PB 1..519 17..535 2595 100 Plus
CG13931-RA 519 CG13931-PA 1..519 17..535 2595 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:41:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG13931-RB 1063 CG13931-RB 106..625 17..536 2600 100 Plus
CG13931-RA 663 CG13931-RA 106..625 17..536 2600 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:41:20
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1701394..1701904 536..26 2555 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:41:21 has no hits.

BS20106.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:30:47 Download gff for BS20106.complete
Subject Subject Range Query Range Percent Splice Strand
CG13931-RA 106..623 17..534 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:41:14 Download gff for BS20106.complete
Subject Subject Range Query Range Percent Splice Strand
CG13931-RA 106..623 17..534 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:47:02 Download gff for BS20106.complete
Subject Subject Range Query Range Percent Splice Strand
CG13931-RA 106..623 17..534 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:47:02 Download gff for BS20106.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1701396..1701907 23..534 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:41:14 Download gff for BS20106.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1701396..1701907 23..534 99   Minus

BS20106.pep Sequence

Translation from 16 to 534

> BS20106.pep
MSKLSSGGPSMAAKLLAIMLLLVATGVQARRLGHRRLIIHVPVKVKTHHH
THTVYKVLHGSHGGGGGGGVKQTVYKVLGFSTHGGGIAKGGVGGGGGIGH
GAHGSYDMGSIGGMGHGEITYEDMHGCESGKVIPAARDMIFNHYSRHGQS
DGTAEDYAEELDDFVDLRDGWL*

BS20106.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:56:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG13931-PB 172 CG13931-PB 1..172 1..172 925 100 Plus
CG13931-PA 172 CG13931-PA 1..172 1..172 925 100 Plus