BS20106.complete Sequence
551 bp assembled on 2011-01-07
GenBank Submission: KX800894
> BS20106.complete
GAAGTTATCAGTCGACATGTCCAAACTGTCATCTGGTGGTCCCTCCATGG
CGGCCAAGCTGCTGGCCATAATGCTTCTGCTGGTGGCGACGGGAGTGCAG
GCGCGGCGTCTGGGCCACCGACGCCTAATCATCCACGTGCCGGTCAAGGT
GAAGACGCACCACCACACTCACACCGTGTACAAGGTGCTACACGGATCAC
ATGGTGGCGGTGGCGGCGGAGGTGTAAAGCAAACGGTATACAAAGTGCTT
GGCTTCTCCACACACGGTGGTGGCATTGCCAAGGGCGGCGTAGGAGGAGG
AGGAGGCATTGGCCATGGAGCCCACGGTAGCTACGACATGGGCAGCATAG
GAGGAATGGGACACGGCGAAATCACATACGAGGACATGCACGGATGCGAG
AGCGGCAAAGTGATTCCGGCGGCCAGAGACATGATTTTCAATCACTACTC
GCGTCACGGCCAAAGCGATGGAACTGCCGAGGATTACGCCGAGGAGCTGG
ACGACTTTGTAGACCTAAGGGATGGCTGGTTGTGAAAGCTTTCTAGACCA
T
BS20106.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:41:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13931-RB | 519 | CG13931-PB | 1..519 | 17..535 | 2595 | 100 | Plus |
CG13931-RA | 519 | CG13931-PA | 1..519 | 17..535 | 2595 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:41:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13931-RB | 1063 | CG13931-RB | 106..625 | 17..536 | 2600 | 100 | Plus |
CG13931-RA | 663 | CG13931-RA | 106..625 | 17..536 | 2600 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:41:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 1701394..1701904 | 536..26 | 2555 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:41:21 has no hits.
BS20106.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:30:47 Download gff for
BS20106.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13931-RA | 106..623 | 17..534 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:41:14 Download gff for
BS20106.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13931-RA | 106..623 | 17..534 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:47:02 Download gff for
BS20106.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13931-RA | 106..623 | 17..534 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:47:02 Download gff for
BS20106.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 1701396..1701907 | 23..534 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:41:14 Download gff for
BS20106.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 1701396..1701907 | 23..534 | 99 | | Minus |
BS20106.pep Sequence
Translation from 16 to 534
> BS20106.pep
MSKLSSGGPSMAAKLLAIMLLLVATGVQARRLGHRRLIIHVPVKVKTHHH
THTVYKVLHGSHGGGGGGGVKQTVYKVLGFSTHGGGIAKGGVGGGGGIGH
GAHGSYDMGSIGGMGHGEITYEDMHGCESGKVIPAARDMIFNHYSRHGQS
DGTAEDYAEELDDFVDLRDGWL*
BS20106.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:56:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13931-PB | 172 | CG13931-PB | 1..172 | 1..172 | 925 | 100 | Plus |
CG13931-PA | 172 | CG13931-PA | 1..172 | 1..172 | 925 | 100 | Plus |