BS20111.complete Sequence
539 bp assembled on 2011-01-07
GenBank Submission: KX800966
> BS20111.complete
GAAGTTATCAGTCGACATGAAGGATCGATTCAAGTGGTTGTCGCTGGAGC
TGCTCCTGCTGATAGGCGCCGCAGTCGCCTTTCCGGACGGCGCTCCGGCG
GACACGTGCGTGAAGCAGCGGGCGAATCAGCCGAATCATGGCAAGGCCCG
GAGTCAGCCGGCTCACTCGAATCCGTACGAGGTGGTGGCCGATGCGCAGA
CCTACCATCCCGGCCAGCAGATATCGGTGGTCATCTACCCGCACTCGGAC
CAGAGCACCGTCTTCCGGGGATTTTTCCTGCAGGCGCGTGATGCCAACTC
GAACGAGTGGATCGGCGAGTGGGTGCAGAGCGAGAACACCAAGACCATTC
CAGAGTGCTCGGCCATTACGCACTCGGACAACCGGGACAAGCTGGGCGCC
AAGCTCATCTGGAAGGCACCGCAAAATAAGCGGGGACAAGTCTACTTCAC
GGGCACTGTGCTACAGGAGTACGGAACGTTTTGGAGCGACATTGTGAACA
AAGTGCAGGCGGAGCGGCCATAAAAGCTTTCTAGACCAT
BS20111.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:40:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14515-RA | 507 | CG14515-PA | 1..507 | 17..523 | 2520 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:40:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14515-RA | 639 | CG14515-RA | 78..585 | 16..523 | 2525 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:40:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29197633..29198068 | 16..451 | 2165 | 99.8 | Plus |
3R | 32079331 | 3R | 29199085..29199157 | 451..523 | 365 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:40:36 has no hits.
BS20111.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:30:40 Download gff for
BS20111.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14515-RA | 52..556 | 17..521 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:41:04 Download gff for
BS20111.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14515-RA | 79..583 | 17..521 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:46:47 Download gff for
BS20111.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14515-RA | 79..583 | 17..521 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:46:47 Download gff for
BS20111.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29197634..29198067 | 17..450 | 99 | -> | Plus |
3R | 29199085..29199155 | 451..521 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:41:04 Download gff for
BS20111.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25023356..25023789 | 17..450 | 99 | -> | Plus |
arm_3R | 25024807..25024877 | 451..521 | 100 | | Plus |
BS20111.pep Sequence
Translation from 16 to 522
> BS20111.pep
MKDRFKWLSLELLLLIGAAVAFPDGAPADTCVKQRANQPNHGKARSQPAH
SNPYEVVADAQTYHPGQQISVVIYPHSDQSTVFRGFFLQARDANSNEWIG
EWVQSENTKTIPECSAITHSDNRDKLGAKLIWKAPQNKRGQVYFTGTVLQ
EYGTFWSDIVNKVQAERP*
BS20111.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:55:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14515-PA | 168 | CG14515-PA | 1..168 | 1..168 | 901 | 100 | Plus |