Clone BS20111 Report

Search the DGRC for BS20111

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:201
Well:11
Vector:pDNR-Dual
Associated Gene/TranscriptCG14515-RA
Protein status:BS20111.pep: full length peptide match
Sequenced Size:539

Clone Sequence Records

BS20111.complete Sequence

539 bp assembled on 2011-01-07

GenBank Submission: KX800966

> BS20111.complete
GAAGTTATCAGTCGACATGAAGGATCGATTCAAGTGGTTGTCGCTGGAGC
TGCTCCTGCTGATAGGCGCCGCAGTCGCCTTTCCGGACGGCGCTCCGGCG
GACACGTGCGTGAAGCAGCGGGCGAATCAGCCGAATCATGGCAAGGCCCG
GAGTCAGCCGGCTCACTCGAATCCGTACGAGGTGGTGGCCGATGCGCAGA
CCTACCATCCCGGCCAGCAGATATCGGTGGTCATCTACCCGCACTCGGAC
CAGAGCACCGTCTTCCGGGGATTTTTCCTGCAGGCGCGTGATGCCAACTC
GAACGAGTGGATCGGCGAGTGGGTGCAGAGCGAGAACACCAAGACCATTC
CAGAGTGCTCGGCCATTACGCACTCGGACAACCGGGACAAGCTGGGCGCC
AAGCTCATCTGGAAGGCACCGCAAAATAAGCGGGGACAAGTCTACTTCAC
GGGCACTGTGCTACAGGAGTACGGAACGTTTTGGAGCGACATTGTGAACA
AAGTGCAGGCGGAGCGGCCATAAAAGCTTTCTAGACCAT

BS20111.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:40:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG14515-RA 507 CG14515-PA 1..507 17..523 2520 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:40:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG14515-RA 639 CG14515-RA 78..585 16..523 2525 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:40:35
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29197633..29198068 16..451 2165 99.8 Plus
3R 32079331 3R 29199085..29199157 451..523 365 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:40:36 has no hits.

BS20111.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:30:40 Download gff for BS20111.complete
Subject Subject Range Query Range Percent Splice Strand
CG14515-RA 52..556 17..521 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:41:04 Download gff for BS20111.complete
Subject Subject Range Query Range Percent Splice Strand
CG14515-RA 79..583 17..521 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:46:47 Download gff for BS20111.complete
Subject Subject Range Query Range Percent Splice Strand
CG14515-RA 79..583 17..521 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:46:47 Download gff for BS20111.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29197634..29198067 17..450 99 -> Plus
3R 29199085..29199155 451..521 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:41:04 Download gff for BS20111.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25023356..25023789 17..450 99 -> Plus
arm_3R 25024807..25024877 451..521 100   Plus

BS20111.pep Sequence

Translation from 16 to 522

> BS20111.pep
MKDRFKWLSLELLLLIGAAVAFPDGAPADTCVKQRANQPNHGKARSQPAH
SNPYEVVADAQTYHPGQQISVVIYPHSDQSTVFRGFFLQARDANSNEWIG
EWVQSENTKTIPECSAITHSDNRDKLGAKLIWKAPQNKRGQVYFTGTVLQ
EYGTFWSDIVNKVQAERP*

BS20111.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:55:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG14515-PA 168 CG14515-PA 1..168 1..168 901 100 Plus