BS20113.complete Sequence
1322 bp assembled on 2011-01-07
GenBank Submission: KX805362
> BS20113.complete
GAAGTTATCAGTCGACATGTGTTTTAATGTACTGGGAGTGAGCAATCTGC
TACCCGATTGCAGCATTGCAAACCGGGTCCATCTGTTCTCTTTGCTGCAG
CAACTCCAGAACCAGGAGCGTCGTCCGGAGGAAGTGAGTGACGAGTTGCG
GGATCGCTACAACGTATTTCGCCAGGTTTTGCCCAACTACCCGCCACCGG
AACAGCCAGACGACGATATGCTAGCAAACTTTGATGAGTTATTCCAGGAG
CAGCTTTCAATATCGATCTTCACAGACACTGAATCATCCGGCGAGGAGAC
CTGCGAATCCAGTCTGGATAGTGACTCCGAGCAGATCAGCATCGGGATGG
ATCGTCATCATTAAAAGCTTTCTAAACCATTCCTTTGGCGCGCCGGGCCC
GGTAAAGGGGTCCTTAACCTAAATCTTAATTTTAATCATAATCCCCACCT
TCCCCCAGAAAAACCTGGGCCTGAAAAAGGGGTTGGGAATTCCCCCAAAA
AAAAACCCCCGGGGGGGAAACCAAAGGTTTTATAAAAAAACCCAAAAGGG
GGTTTAAAGGGCTTTTTGGGTGTTTTAACAAGGAGGCCCCAAGGAACCCT
TAAATAAATTTTCCCCCCCCCCCCCCCCCCCCCTCCAAAAATGTGTTTGT
TTTATTTAAAAACTTTTCGGCGCGAAGAGAGACCCCCCCCACAAAGAGGG
GTTGAAAAAAACAAAAACACCCCCCCGCCCCCCACCCCCCCTCTTTTTCC
CTTTTTTTTTTAATTTTTTTCCGCGGGAAAAAGAAAGGGGGAGAAAAAAA
AATAATTTTTTTTTTTCTCCCTCTTTTATATAAAAAAAAAAGGGAGAGCC
ACCCCCCCGGGGGGGGGGGGGAAGAAAAAAAAAAAAAATAATCTTATTTC
TACCCTACAATAGTGAAAAAGAAGAGGGGGCCCTTTCCCCCCCTCCCCCC
CCCCCCCCCCTCCTCTTTTAATAAAATAAAAAAAAAAGAAGAGAAAAAAA
AGATGTGCCTTTCTTTTTATACTCACACAAAAAAAAAAAAAAAAAATATT
ATTTTTTTTTTTTTTTAATGAAAAGGAAGAAAAAAGGAAGAAAAAAAATA
CACAACACCCCCTCCCCCCCCCCCCCCCCCCCCCCTCTCCTTTCCCTTTT
CTTTCTACTATTAATATAATTTCAATTAAAAAATAAATATAAAAAATGAA
AAATATAAAGAAAGAAGAGGGAGGGAAAAGAGAAAAAAAGAAGAAAGAAA
AAAGAAGAAAAAAAAAAAAAGATAGAAATATTGGTTTATTATTAATTATT
ATTTTTTTTATTTTTTCTTTTA
BS20113.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:42:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15172-RD | 348 | CG15172-PD | 1..347 | 17..363 | 1735 | 100 | Plus |
| CG15172-RC | 348 | CG15172-PC | 1..347 | 17..363 | 1735 | 100 | Plus |
| CG15172-RB | 348 | CG15172-PB | 1..347 | 17..363 | 1735 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:42:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15172-RD | 629 | CG15172-RD | 161..508 | 16..363 | 1740 | 100 | Plus |
| CG15172-RC | 574 | CG15172-RC | 108..455 | 16..363 | 1740 | 100 | Plus |
| CG15172-RB | 631 | CG15172-RB | 165..512 | 16..363 | 1740 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:42:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19023178..19023525 | 16..363 | 1740 | 100 | Plus |
| 2L | 23513712 | 2L | 19075260..19075375 | 193..78 | 460 | 93.1 | Minus |
| 2L | 23513712 | 2L | 19075157..19075250 | 319..226 | 365 | 92.6 | Minus |
Blast to na_te.dros performed 2014-11-26 15:42:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 6403..6499 | 1196..1298 | 121 | 63.1 | Plus |
BS20113.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:30:54 Download gff for
BS20113.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15172-RA | 16..362 | 17..363 | 100 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:41:23 Download gff for
BS20113.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15172-RB | 166..512 | 17..363 | 100 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:47:22 Download gff for
BS20113.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15172-RB | 166..512 | 17..363 | 100 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:47:22 Download gff for
BS20113.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19023179..19023525 | 17..363 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:41:23 Download gff for
BS20113.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19023179..19023525 | 17..363 | 100 | == | Plus |
BS20113.pep Sequence
Translation from 16 to 363
> BS20113.pep
MCFNVLGVSNLLPDCSIANRVHLFSLLQQLQNQERRPEEVSDELRDRYNV
FRQVLPNYPPPEQPDDDMLANFDELFQEQLSISIFTDTESSGEETCESSL
DSDSEQISIGMDRHH*
BS20113.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:56:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15172-PD | 115 | CG15172-PD | 1..115 | 1..115 | 602 | 100 | Plus |
| CG15172-PC | 115 | CG15172-PC | 1..115 | 1..115 | 602 | 100 | Plus |
| CG15172-PB | 115 | CG15172-PB | 1..115 | 1..115 | 602 | 100 | Plus |
| CG15172-PA | 115 | CG15172-PA | 1..115 | 1..115 | 602 | 100 | Plus |
