BS20114.complete Sequence
509 bp assembled on 2011-01-07
GenBank Submission: KX805604
> BS20114.complete
GAAGTTATCAGTCGACATGCGTGCGGTTATACAAAGGGTTAAGGCTGCCA
AAGTGACGGTGTTGGATGAGCTGGTGTCCTCCATTGGACCAGGCCTGTGC
GTGCTGGTGGGAATCAAGGCCAGCGACACCGCCAAGGATGTTGAGTATCT
TGTCCGGAAAATCTTGGCTCTCCGTTTATTCGAGGAGGAGGGCAAGCGTT
GGCAAAAGTCCGTGAAGGATCTGAACCTAGAACTGCTGTGCGTCTCGCAG
TTTACACTGTATCACCGCCTTAAGGGCAACAAACCGGATTTTTTGGCTGC
CATGAAGGGCGAGGAGGCGCAGGAGTTGTACAATCAATTTTTGGATCGCC
TAGGTCAATCCTACGATAGCACCAAGATTAAAGATGGCAAATTTGGAGCA
TACATGCAAGTGCACATAGAAAACGATGGACCCGTAACCATTAATTTGGA
GTCCCCCGAACAAAAGGATACTGACAGAGAAGTGGACAAATGAAAGCTTT
CTAGACCAT
BS20114.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:42:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18643-RB | 477 | CG18643-PB | 1..477 | 17..493 | 2385 | 100 | Plus |
| CG18643-RC | 138 | CG18643-PC | 1..134 | 17..150 | 670 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:42:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18643-RB | 524 | CG18643-RB | 22..498 | 17..493 | 2385 | 100 | Plus |
| CG18643-RC | 528 | CG18643-RC | 22..502 | 17..493 | 2310 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:42:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11430339..11430571 | 151..383 | 1165 | 100 | Plus |
| 3R | 32079331 | 3R | 11430625..11430736 | 382..493 | 560 | 100 | Plus |
| 3R | 32079331 | 3R | 11430179..11430270 | 59..150 | 460 | 100 | Plus |
| 3R | 32079331 | 3R | 11430082..11430124 | 17..59 | 215 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:42:17 has no hits.
BS20114.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:30:55 Download gff for
BS20114.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18643-RB | 22..497 | 17..492 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:41:25 Download gff for
BS20114.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18643-RB | 22..497 | 17..492 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:47:23 Download gff for
BS20114.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18643-RB | 22..497 | 17..492 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:47:23 Download gff for
BS20114.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11430339..11430571 | 151..383 | 100 | -> | Plus |
| 3R | 11430627..11430735 | 384..492 | 100 | | Plus |
| 3R | 11430082..11430124 | 17..59 | 100 | -> | Plus |
| 3R | 11430180..11430270 | 60..150 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:41:25 Download gff for
BS20114.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7255804..7255846 | 17..59 | 100 | -> | Plus |
| arm_3R | 7255902..7255992 | 60..150 | 100 | -> | Plus |
| arm_3R | 7256061..7256293 | 151..383 | 100 | -> | Plus |
| arm_3R | 7256349..7256457 | 384..492 | 100 | | Plus |
BS20114.pep Sequence
Translation from 16 to 492
> BS20114.pep
MRAVIQRVKAAKVTVLDELVSSIGPGLCVLVGIKASDTAKDVEYLVRKIL
ALRLFEEEGKRWQKSVKDLNLELLCVSQFTLYHRLKGNKPDFLAAMKGEE
AQELYNQFLDRLGQSYDSTKIKDGKFGAYMQVHIENDGPVTINLESPEQK
DTDREVDK*
BS20114.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:56:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18643-PB | 158 | CG18643-PB | 1..158 | 1..158 | 802 | 100 | Plus |
| CG18643-PC | 45 | CG18643-PC | 1..45 | 1..45 | 215 | 100 | Plus |
