BS20115.complete Sequence
437 bp assembled on 2011-01-07
GenBank Submission: KX805605
> BS20115.complete
GAAGTTATCAGTCGACATGACGACAACGCTGCCGGAGAAGGAAGCGGAAA
CGCAGCAGGAGATCAGGGAGCGGGAGGCCAAGGCTCTGGAGGACCGAAAG
GAGCGCAAGATCTACGAGAACTTTGCCACGCCCCTGGCAGGCACTTTTCT
CAACCTGCCACGCGAGCCCGTGGAGATCGAGTGCCCCGCCTGCGGAATCA
AGGATCTGAGTGTGGTGCAAAATGATCTGAAGTGGTGGGCCAGTGAACTA
AACCGCATTGTGGGATGTCTTTTTGTGACCTTCTGCTGCTGCTGCTGCTT
TAATTACTATGTGCCGTGCAAACAAACCGATCGAAGTCATTACTGCGGCA
ATTGCGGCTGTTACTTTGGACGTTCCATGAAGAGGAGGCAACCACTCAAA
TTGAAGGCAACCACCGCCTAGAAGCTTTCTAGACCAT
BS20115.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:42:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34445-RA | 405 | CG34445-PA | 1..405 | 17..421 | 2025 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:42:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34445-RA | 527 | CG34445-RA | 25..430 | 16..421 | 2030 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:42:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 22648193..22648454 | 277..16 | 1310 | 100 | Minus |
2R | 25286936 | 2R | 22647989..22648133 | 421..277 | 725 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:42:22 has no hits.
BS20115.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:30:56 Download gff for
BS20115.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34445-RA | 21..425 | 17..421 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:41:27 Download gff for
BS20115.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34445-RA | 26..430 | 17..421 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:47:25 Download gff for
BS20115.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34445-RA | 26..430 | 17..421 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:47:25 Download gff for
BS20115.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 22647989..22648133 | 277..421 | 100 | <- | Minus |
2R | 22648194..22648453 | 17..276 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:41:27 Download gff for
BS20115.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 18535494..18535638 | 277..421 | 100 | <- | Minus |
arm_2R | 18535699..18535958 | 17..276 | 100 | | Minus |
BS20115.pep Sequence
Translation from 16 to 420
> BS20115.pep
MTTTLPEKEAETQQEIREREAKALEDRKERKIYENFATPLAGTFLNLPRE
PVEIECPACGIKDLSVVQNDLKWWASELNRIVGCLFVTFCCCCCFNYYVP
CKQTDRSHYCGNCGCYFGRSMKRRQPLKLKATTA*
BS20115.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:56:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34445-PA | 134 | CG34445-PA | 1..134 | 1..134 | 744 | 100 | Plus |