BS20117.complete Sequence
461 bp assembled on 2011-01-07
GenBank Submission: KX804705
> BS20117.complete
GAAGTTATCAGTCGACATGGAAAAGGCAGCTGGTTTTGTTATTTTTCGCC
GCCTTTGTGGGGAAATACAATACCTATTGCTGAAGGCTTCCTACGGCTCC
TTCCACTGGAGTTCTCCCAAGGGACATGTGGACCCAGGCGAGGATGATTT
TACCACTGCCCTGCGAGAAACGAAAGAGGAAGCCGGGTACGACGAGAAGG
ATCTGATCATATACAAGGACACTCCGCTGACCCTGAATTATCAGGTGCAA
GACAAGCCGAAGATTGTTATTTACTGGCTAGCGGAGCTGCGGAATCCCTG
CCAGGAGCCCATTCTCTCCGAGGAGCACACCGACCTCAAGTGGCTGCCCA
AGGAGGAGGCCAAGCAGTGCGTCGGCTTTAAGGATAACCAAGTCATGATC
GACAAGTTCCACCAAATGATTTTAGATCAAAACAAACCAATGTGAAAGCT
TTCTAGACCAT
BS20117.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:42:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Apf-RA | 429 | CG31713-PA | 1..429 | 17..445 | 2145 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:42:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Apf-RA | 555 | CG31713-RA | 51..482 | 15..446 | 2160 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:42:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9938251..9938511 | 446..186 | 1305 | 100 | Minus |
2L | 23513712 | 2L | 9938568..9938740 | 187..15 | 865 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:42:52 has no hits.
BS20117.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:30:59 Download gff for
BS20117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Apf-RA | 50..477 | 17..444 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:41:31 Download gff for
BS20117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Apf-RA | 53..480 | 17..444 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:47:32 Download gff for
BS20117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Apf-RA | 53..480 | 17..444 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:47:32 Download gff for
BS20117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9938253..9938510 | 187..444 | 100 | <- | Minus |
2L | 9938565..9938738 | 17..186 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:41:31 Download gff for
BS20117.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9938253..9938510 | 187..444 | 100 | <- | Minus |
arm_2L | 9938565..9938738 | 17..186 | 97 | | Minus |
BS20117.pep Sequence
Translation from 16 to 444
> BS20117.pep
MEKAAGFVIFRRLCGEIQYLLLKASYGSFHWSSPKGHVDPGEDDFTTALR
ETKEEAGYDEKDLIIYKDTPLTLNYQVQDKPKIVIYWLAELRNPCQEPIL
SEEHTDLKWLPKEEAKQCVGFKDNQVMIDKFHQMILDQNKPM*
BS20117.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:56:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Apf-PA | 142 | CG31713-PA | 1..142 | 1..142 | 767 | 100 | Plus |