BS20118.complete Sequence
635 bp assembled on 2011-01-07
GenBank Submission: KX800216
> BS20118.complete
GAAGTTATCAGTCGACATGTTCCCAAAGTCGGGGAAGACATGTGCGCTTC
TTGCAGCCCGTTTGCCTTATGGGTTTGCGTTTAATCAACTCAAGACGATG
TCACCTGTTCATCTCTTTCACTCGACTGCCTTAATGCAAAACTACATAAG
TGGAACAAGAAAACCAATTTCAATCAGAGAAAAACGGGAATACAAATATT
CATCTCAAGACATGAACTGGACGAAACATGGAGGATGCTTTAAGCAAAAC
TACAGTACCGAATCCGCCTCCACGGGGACCGCAACGACCTTAAAGATAAC
TAAAAGGGAACAACTGAAGCGGGCATTCAAGGAGTATGGAGCAACCATTG
TTGTCTTTCATGTGGTCATTTCCGTCATTTCTCTTGGAGGCTTTTATGCA
CTTGTTTCCAGTGGAATAAACCTGGTGCCCGTACTGGAATACTTTGGAAT
GGGTTCATCGGCGGTTGCGGAGAAAGTTGCCGCAGGAAGCACCTTTGTTG
TGGCCTTTGCCGTTCATAAAATCTTTGCGCCAGCCAGAATCAGCATCACA
TTGGGCACCACACCGTTTATCGTGAGGTATTTGCGATCCAAGGGACTTCT
GAAGCCAAAAAGCACATAGAAGCTTTCTAGACCAT
BS20118.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:43:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15403-RA | 603 | CG15403-PA | 1..603 | 17..619 | 3015 | 100 | Plus |
| CG17508-RA | 966 | CG17508-PA | 638..890 | 297..549 | 320 | 75.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:43:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15403-RA | 855 | CG15403-RA | 131..733 | 17..619 | 3015 | 100 | Plus |
| CG17508-RA | 1228 | CG17508-RA | 719..971 | 297..549 | 320 | 75.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:43:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3128765..3129367 | 17..619 | 3015 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:43:01 has no hits.
BS20118.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:31:01 Download gff for
BS20118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15403-RA | 51..648 | 22..619 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:41:34 Download gff for
BS20118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15403-RA | 136..733 | 22..619 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:47:35 Download gff for
BS20118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15403-RA | 136..733 | 22..619 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:47:35 Download gff for
BS20118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3128770..3129367 | 22..619 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:41:34 Download gff for
BS20118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3128770..3129367 | 22..619 | 100 | | Plus |
BS20118.pep Sequence
Translation from 16 to 618
> BS20118.pep
MFPKSGKTCALLAARLPYGFAFNQLKTMSPVHLFHSTALMQNYISGTRKP
ISIREKREYKYSSQDMNWTKHGGCFKQNYSTESASTGTATTLKITKREQL
KRAFKEYGATIVVFHVVISVISLGGFYALVSSGINLVPVLEYFGMGSSAV
AEKVAAGSTFVVAFAVHKIFAPARISITLGTTPFIVRYLRSKGLLKPKST
*
BS20118.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:56:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15403-PA | 200 | CG15403-PA | 1..200 | 1..200 | 1016 | 100 | Plus |
| CG17508-PA | 321 | CG17508-PA | 164..321 | 53..200 | 421 | 60.1 | Plus |
| CG14613-PB | 241 | CG14613-PB | 91..212 | 78..200 | 161 | 31.2 | Plus |
| CG14613-PA | 241 | CG14613-PA | 91..212 | 78..200 | 161 | 31.2 | Plus |
