BS20119.complete Sequence
563 bp assembled on 2011-01-07
GenBank Submission: KX801988
> BS20119.complete
GAAGTTATCAGTCGACATGCCCCGCCAACGTTCGGAAGGGCCGCGATCCA
CAGGATCTATGCGGCGCCAAAGCAGCCGGAGCAGCCATGTCTTCGCCACA
AAGCCGTCTCGTGGGAGCAGCAAGGATCTGCCGGCTGTGCAGCAGCCCAA
GAAGGAATCCCTGCCAGCTGCAGCTCCTGCTGCCTCGGCAGCCACCTCCA
CAGAGACAAAAGGTCCTAGCACAGCAGATAGGTTCAAGGACATGGCCACC
ACGGCGGCTGGCGTGGCAGCAGGATCAGCTGTGGGCCACGCTGTGGGCGC
AGGACTCACGGGAATGTTCCAGGGACGTGGTCAGGCAGCCCCGGCCAAGG
AGCAGCCTCAACAGGAGGGATCCTTGGCAGCTTCAGCTTCGCAATCAGTA
CCGAAACCTCAACTAGTGGAGGATGGTCCCTGCGCCTTCGAGCTGAGGCA
GTTCCTCAAGTGCACCGAGGACAACAGCAGTGATCTCTCCGTTTGCAAGG
AGTTTAACGAGGCAATGCAGCAGTGTCGGCGGCGCTATAATGTCTGAAAG
CTTTCTAGACCAT
BS20119.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:43:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31007-RA | 531 | CG31007-PA | 1..531 | 17..547 | 2655 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:43:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31007-RA | 758 | CG31007-RA | 41..571 | 17..547 | 2655 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:43:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 30991887..30992417 | 547..17 | 2655 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:43:17 has no hits.
BS20119.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:31:02 Download gff for
BS20119.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31007-RA | 41..570 | 17..546 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:41:35 Download gff for
BS20119.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31007-RA | 41..570 | 17..546 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:47:40 Download gff for
BS20119.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31007-RA | 41..570 | 17..546 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:47:40 Download gff for
BS20119.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30991888..30992417 | 17..546 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:41:35 Download gff for
BS20119.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 26817610..26818139 | 17..546 | 100 | | Minus |
BS20119.pep Sequence
Translation from 16 to 546
> BS20119.pep
MPRQRSEGPRSTGSMRRQSSRSSHVFATKPSRGSSKDLPAVQQPKKESLP
AAAPAASAATSTETKGPSTADRFKDMATTAAGVAAGSAVGHAVGAGLTGM
FQGRGQAAPAKEQPQQEGSLAASASQSVPKPQLVEDGPCAFELRQFLKCT
EDNSSDLSVCKEFNEAMQQCRRRYNV*
BS20119.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:56:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31007-PA | 176 | CG31007-PA | 1..176 | 1..176 | 894 | 100 | Plus |
CG31008-PA | 114 | CG31008-PA | 32..114 | 73..176 | 255 | 51 | Plus |
CG5010-PA | 170 | CG5010-PA | 42..169 | 48..176 | 232 | 37.4 | Plus |
CG5010-PB | 122 | CG5010-PB | 13..121 | 67..176 | 215 | 40 | Plus |