BS20131.complete Sequence
392 bp assembled on 2011-01-07
GenBank Submission: KX801329
> BS20131.complete
GAAGTTATCAGTCGACATGTTACACCTGAGATTTGTCTTTATGGCCGCTT
TACCGCTGCTGCTGTTGCTTCTACTTCAGTTTAGTCCACCTGCAGATGGC
TTTATCATTCGACTGATTACGGAGACACTGCAGAATAACGTGGCTGGTGA
GCCGGTTCTTCACGAGCGGACTTCTTGGGACTTTGATCCGGAGGCGGCCA
AGAGGGCCAGATCGCTGTACTACGAGAAGAACGGATTCCGCTCGTCCAAA
TTCATCGAGCGACTGGGCGTTGGTCTGGATGGGCGGCACGAGGAGCGGCG
GGCGGAGCAAGGACATCGCGATGTGGGACGACTGAATGGGGAACACAATG
TGAACTATCCGCCTCCACCGGCTTAGAAGCTTTCTAGACCAT
BS20131.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:38:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15649-RB | 360 | CG15649-PB | 1..360 | 17..376 | 1800 | 100 | Plus |
CG15649-RA | 360 | CG15649-PA | 1..360 | 17..376 | 1800 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:38:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15649-RB | 766 | CG15649-RB | 78..437 | 17..376 | 1800 | 100 | Plus |
CG15649-RA | 462 | CG15649-RA | 78..437 | 17..376 | 1800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:38:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20973458..20973634 | 226..50 | 885 | 100 | Minus |
2R | 25286936 | 2R | 20973245..20973396 | 376..225 | 760 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 15:38:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2806..2877 | 81..8 | 104 | 62.2 | Minus |
BS20131.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:30:28 Download gff for
BS20131.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15649-RB | 63..417 | 22..376 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:40:45 Download gff for
BS20131.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15649-RA | 83..437 | 22..376 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:46:09 Download gff for
BS20131.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15649-RA | 83..437 | 22..376 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:46:09 Download gff for
BS20131.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20973245..20973394 | 227..376 | 100 | <- | Minus |
2R | 20973458..20973634 | 50..226 | 100 | <- | Minus |
2R | 20973908..20973935 | 22..49 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:40:45 Download gff for
BS20131.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16860750..16860899 | 227..376 | 100 | <- | Minus |
arm_2R | 16860963..16861139 | 50..226 | 100 | <- | Minus |
arm_2R | 16861413..16861440 | 22..49 | 100 | | Minus |
BS20131.pep Sequence
Translation from 16 to 375
> BS20131.pep
MLHLRFVFMAALPLLLLLLLQFSPPADGFIIRLITETLQNNVAGEPVLHE
RTSWDFDPEAAKRARSLYYEKNGFRSSKFIERLGVGLDGRHEERRAEQGH
RDVGRLNGEHNVNYPPPPA*
BS20131.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:56:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15649-PB | 119 | CG15649-PB | 1..119 | 1..119 | 626 | 100 | Plus |
CG15649-PA | 119 | CG15649-PA | 1..119 | 1..119 | 626 | 100 | Plus |