BS20135.complete Sequence
524 bp assembled on 2011-01-07
GenBank Submission: KX804133
> BS20135.complete
GAAGTTATCAGTCGACATGCTACGATTGCTAGTTTGTTTGTGGCTACTGG
TGTACAGTGGTTCCAGCTATGAGGTGCAAAACAAACCCGTCACGGAAGAT
TGCCTAGACTGTCTATGCGAAACAATGAGTGGCTGCAATGCATCCGCAAT
TTGCGTAAATGGGGCCTGCGGTATATTCCGAATCACTTGGGGCTACTGGG
TGGAGGCGGGCAAACTAACTTTGCCCACAGATACAGCTCTCTCCGAAGAC
GCTTTTACGAACTGCGTTAATCAGCCCCACTGTGCAGCGAACACGGTGCA
GAATTATATGTTCAAACATGGCCAGGATTGCAATGGAGACGAGCACATCG
ATTGCCTGGATTTCGGAGCACTCCACAAACTGGGCAATCTGAAGTGCCAG
GAAGAGTTGCCCTACATCTTTGCCAAAGTCTTCAATCGATGTCTGAAATC
CAAGGAGCGGATGGCAGAGGAAAAGATCATCAAGGAGCAGGAAACGGTTT
CAACATAAAAGCTTTCTAGACCAT
BS20135.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:43:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6435-RA | 492 | CG6435-PA | 1..492 | 17..508 | 2460 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:43:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6435-RA | 794 | CG6435-RA | 57..548 | 17..508 | 2460 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:43:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16874474..16874731 | 251..508 | 1290 | 100 | Plus |
| 2R | 25286936 | 2R | 16874240..16874417 | 74..251 | 890 | 100 | Plus |
| 2R | 25286936 | 2R | 16873828..16873885 | 17..74 | 290 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:43:53 has no hits.
BS20135.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:31:07 Download gff for
BS20135.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6435-RA | 50..539 | 17..506 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:41:44 Download gff for
BS20135.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6435-RA | 57..546 | 17..506 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:47:55 Download gff for
BS20135.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6435-RA | 57..546 | 17..506 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:47:55 Download gff for
BS20135.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16873828..16873885 | 17..74 | 100 | -> | Plus |
| 2R | 16874241..16874417 | 75..251 | 100 | -> | Plus |
| 2R | 16874475..16874729 | 252..506 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:41:44 Download gff for
BS20135.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12761333..12761390 | 17..74 | 100 | -> | Plus |
| arm_2R | 12761746..12761922 | 75..251 | 100 | -> | Plus |
| arm_2R | 12761980..12762234 | 252..506 | 100 | | Plus |
BS20135.pep Sequence
Translation from 16 to 507
> BS20135.pep
MLRLLVCLWLLVYSGSSYEVQNKPVTEDCLDCLCETMSGCNASAICVNGA
CGIFRITWGYWVEAGKLTLPTDTALSEDAFTNCVNQPHCAANTVQNYMFK
HGQDCNGDEHIDCLDFGALHKLGNLKCQEELPYIFAKVFNRCLKSKERMA
EEKIIKEQETVST*
BS20135.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:56:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6435-PA | 163 | CG6435-PA | 1..163 | 1..163 | 896 | 100 | Plus |
| CG6429-PA | 159 | CG6429-PA | 23..151 | 19..148 | 465 | 56.9 | Plus |
| CG6426-PA | 161 | CG6426-PA | 25..155 | 19..149 | 438 | 55.7 | Plus |
| CG6421-PA | 161 | CG6421-PA | 5..156 | 4..147 | 424 | 53.3 | Plus |
| CG14823-PA | 263 | CG14823-PA | 138..258 | 29..144 | 170 | 37.1 | Plus |
