BS20139.complete Sequence
458 bp assembled on 2011-01-07
GenBank Submission: KX803684
> BS20139.complete
GAAGTTATCAGTCGACATGTTGCTAAATAAGAAAGAACTCATGTACAAAC
AGCTGGTGGAAAAACTGTATGACAGGTGCCAAAGGATTCAGGCGGAAAAT
GAGCGATGTGTGATGAGAGTAAATGGGATCAAAAAGATAGTAAGAAGGCG
CAATCATGACGTGGAGCTTCTAAAACGGCGACTAGATAAGCACGGAGACG
ACTGGCGATCCGTTCCCATGGAGGCTCCACATCCCAAAGGGAAAACCGAG
CAGAAGCGTCGAGGACCGAAGCCCAAAAACAAGCAGGCGGCGGATGAAAC
AGGAGCACCCGGGTCTGAGCCTGGACCCAATACTCCAGCTGCCCGGAAAC
CCCGAAAGCAAAAAGCCAAACAGGCACCCATCAATCCCAATCCAGTCATT
GCACCACCGCATCAACAACCTCAACCTCCACTGTTGACCTGAAAGCTTTC
TAGACCAT
BS20139.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:40:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32202-RA | 426 | CG32202-PA | 1..426 | 17..442 | 2130 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:40:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32202-RA | 616 | CG32202-RA | 94..519 | 17..442 | 2130 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:40:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 18682437..18682763 | 116..442 | 1635 | 100 | Plus |
3L | 28110227 | 3L | 18682277..18682377 | 17..117 | 505 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:40:16 has no hits.
BS20139.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:30:38 Download gff for
BS20139.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32202-RA | 49..468 | 22..441 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:41:01 Download gff for
BS20139.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32202-RA | 99..518 | 22..441 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:46:39 Download gff for
BS20139.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32202-RA | 99..518 | 22..441 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:46:39 Download gff for
BS20139.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18682282..18682377 | 22..117 | 100 | -> | Plus |
3L | 18682439..18682762 | 118..441 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:41:01 Download gff for
BS20139.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 18675382..18675477 | 22..117 | 100 | -> | Plus |
arm_3L | 18675539..18675862 | 118..441 | 100 | | Plus |
BS20139.pep Sequence
Translation from 16 to 441
> BS20139.pep
MLLNKKELMYKQLVEKLYDRCQRIQAENERCVMRVNGIKKIVRRRNHDVE
LLKRRLDKHGDDWRSVPMEAPHPKGKTEQKRRGPKPKNKQAADETGAPGS
EPGPNTPAARKPRKQKAKQAPINPNPVIAPPHQQPQPPLLT*
BS20139.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:56:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32202-PA | 141 | CG32202-PA | 1..141 | 1..141 | 758 | 100 | Plus |