BS20140.complete Sequence
602 bp assembled on 2011-01-07
GenBank Submission: KX801145
> BS20140.complete
GAAGTTATCAGTCGACATGAAGAACCAAAAAAATATAACCATTATACTAA
CTGGGCCACCAGGAGTGGGTAAAACTACACTGGTCCACAAAATATGCTCG
GCTCTGCAGGATAGAGGACGCATTCTTCAAGGATTCTACACAGAGGAAAT
GCGAGGTGAGGGCACCAGCCAAAGAATCGGCTTCGACGTGGTCACGTTAG
CCGGAAAACGAGCAATCCTATCTCGCAAGAATCCCGGGGACCAGCTGCGA
CGACCCAAAGTGGGAGAGTATTCGGTGTTTGTGCAGGACTTCGACAGTCT
CGCTCTGCCAGTACTTGGCACACAGGATTCCCAACCAGAGCCGGATCTCC
TGGTCGTGGATGAAGTGGGCAAAATGGAGCTGCTTAGCAAGCGATTTGAG
TCGGCCATGGCTGATCTCCTGAAGAAAAAGCGGGCCCTATTGGTCACCAT
ACCCGAGAAATCAACATTGGCTTTGGTGGAGCAGCTGAGAAAGTCAGCAG
GATCCAAGATTTACCAGGTGACCAAATTCAATAGGAACGCCTTGGCTGGA
GAGATTACAGAAGAGATTACAAAAGCACTTCTTTAAAAGCTTTCTAGACC
AT
BS20140.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:44:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10581-RA | 570 | CG10581-PA | 1..570 | 17..586 | 2850 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:44:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10581-RA | 587 | CG10581-RA | 8..581 | 13..586 | 2870 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:44:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 21033560..21034086 | 586..60 | 2635 | 100 | Minus |
3L | 28110227 | 3L | 21034146..21034196 | 63..13 | 255 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:44:02 has no hits.
BS20140.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:31:08 Download gff for
BS20140.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10581-RA | 12..579 | 17..584 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:41:45 Download gff for
BS20140.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10581-RA | 12..579 | 17..584 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:47:58 Download gff for
BS20140.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10581-RA | 12..579 | 17..584 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:47:58 Download gff for
BS20140.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 21033562..21034083 | 63..584 | 100 | <- | Minus |
3L | 21034147..21034192 | 17..62 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:41:45 Download gff for
BS20140.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 21027247..21027292 | 17..62 | 100 | | Minus |
arm_3L | 21026662..21027183 | 63..584 | 100 | <- | Minus |
BS20140.pep Sequence
Translation from 16 to 585
> BS20140.pep
MKNQKNITIILTGPPGVGKTTLVHKICSALQDRGRILQGFYTEEMRGEGT
SQRIGFDVVTLAGKRAILSRKNPGDQLRRPKVGEYSVFVQDFDSLALPVL
GTQDSQPEPDLLVVDEVGKMELLSKRFESAMADLLKKKRALLVTIPEKST
LALVEQLRKSAGSKIYQVTKFNRNALAGEITEEITKALL*
BS20140.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:56:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10581-PA | 189 | CG10581-PA | 1..189 | 1..189 | 937 | 100 | Plus |