BS20142.complete Sequence
800 bp assembled on 2011-01-07
GenBank Submission: KX802075
> BS20142.complete
GAAGTTATCAGTCGACATGATTATCCAGAACAGAAGTCCTCTTATAGGCC
ACATTTTGAGACGGTGCCATCGCCAAGCGGTGGAAAGCAACGCTATAAAA
GCCAATTTAACAGCATATTTTGGAAAATGGCCCGAAACGGAGCAGAAGGA
GTTTCGCCAGCATATGCGCATCATCACGGATTTCATTAGTGAGCCAGAGG
AACAGCAGCTGCACGAGGAGATCGAGCCCTATATGAGCCGTCTGCGCTAC
GAGTTCGATCACTGGGACGATGCCATACACGGTTTTCGGGAGACGGAGCG
AAAGAAGTGGTTCCCTAAAAACAGAGAGATCCTGGAGCGCGTGCGCCAAG
TCGCCTTCGATGGAGCAGTTATGCCCTATGTCCACATCCTAGATCTTGCA
CCCGATGGCGTTATCAAGCCCCATGTGGATAGCACGAGATACTGCGGCAA
CACCATCTCTGGAATCAGCCTACTTAGCGACAGTGTGATGCGACTTGTGC
GCACGGATGAGCAGCGGTACCAACAGCAATCGTCGGGAACTGCAACGGAT
CCGAATTCCCAGGGGTCAGAACCCGATGCAGCCTATCGCCATCAACCGGA
GGCGTCTCTAAAGAACAACTTCTACGCTGACATCCTGTTGCCGCGCCGCT
CCTTGTACATAATGAGCCACACGGCTCGCTACAAATTCACACACGAGATA
CTAGCTAAGGAGCACTCCCAGTTTCAGGGTGCGCTGGTGCCCAGGACACG
TCGCATTTCCATCATTTGTCGCAACGAACCCTGAAAGCTTTCTAGACCAT
BS20142.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:44:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14130-RA | 768 | CG14130-PA | 1..768 | 17..784 | 3840 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:44:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14130-RA | 1067 | CG14130-RA | 57..825 | 17..785 | 3845 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:44:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11816123..11816468 | 440..785 | 1730 | 100 | Plus |
3L | 28110227 | 3L | 11815626..11815823 | 75..272 | 990 | 100 | Plus |
3L | 28110227 | 3L | 11815891..11816058 | 272..439 | 840 | 100 | Plus |
3L | 28110227 | 3L | 11815500..11815560 | 17..77 | 305 | 100 | Plus |
3L | 28110227 | 3L | 11837713..11837764 | 626..575 | 185 | 90.4 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:44:22 has no hits.
BS20142.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:31:11 Download gff for
BS20142.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14130-RA | 22..788 | 17..783 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:41:51 Download gff for
BS20142.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14130-RA | 22..788 | 17..783 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:48:05 Download gff for
BS20142.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14130-RA | 57..823 | 17..783 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:48:05 Download gff for
BS20142.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11815500..11815560 | 17..77 | 100 | -> | Plus |
3L | 11815629..11815822 | 78..271 | 100 | -> | Plus |
3L | 11815891..11816058 | 272..439 | 100 | -> | Plus |
3L | 11816123..11816466 | 440..783 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:41:51 Download gff for
BS20142.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11808600..11808660 | 17..77 | 100 | -> | Plus |
arm_3L | 11808729..11808922 | 78..271 | 100 | -> | Plus |
arm_3L | 11808991..11809158 | 272..439 | 100 | -> | Plus |
arm_3L | 11809223..11809566 | 440..783 | 100 | | Plus |
BS20142.pep Sequence
Translation from 16 to 783
> BS20142.pep
MIIQNRSPLIGHILRRCHRQAVESNAIKANLTAYFGKWPETEQKEFRQHM
RIITDFISEPEEQQLHEEIEPYMSRLRYEFDHWDDAIHGFRETERKKWFP
KNREILERVRQVAFDGAVMPYVHILDLAPDGVIKPHVDSTRYCGNTISGI
SLLSDSVMRLVRTDEQRYQQQSSGTATDPNSQGSEPDAAYRHQPEASLKN
NFYADILLPRRSLYIMSHTARYKFTHEILAKEHSQFQGALVPRTRRISII
CRNEP*
BS20142.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:56:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14130-PA | 255 | CG14130-PA | 1..255 | 1..255 | 1349 | 100 | Plus |