Clone BS20145 Report

Search the DGRC for BS20145

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:201
Well:45
Vector:pDNR-Dual
Associated Gene/TranscriptCG13538-RA
Protein status:BS20145.pep: full length peptide match
Sequenced Size:605

Clone Sequence Records

BS20145.complete Sequence

605 bp assembled on 2011-01-07

GenBank Submission: KX800247

> BS20145.complete
GAAGTTATCAGTCGACATGATGTTGGCCGATGAATTTGAAACGATGTGCA
AGAATTATTTTGTAAATTCCATGACTCACGTCTGCTCGTCCCTCGTCCCG
GAATCGCTGACCAAGAAGTATCGCAATCGGCTGATCATTCCCAAGGATCC
CTACAGTATCTTCAAGCTGAACAGCCGGAATTCCAGCTATCTCCTCGCCT
TCCGCTTCCCGGAAATGCGCAATTGCCGAAAACTCTGGATGTCGGATTTG
CGCAATCTAAATTGCGAGATTAAAGGCGGCAAAATGAAGAACTTCTTCTT
CGCCAATAGCTACCGCAAGTGCTACAACTTTGCCATGGACCTAACCTCGG
AGCTAAAGGCGCACTGCGGCGCCAAGAACAATGAGGAGGATACGCAGTCG
GGCTACTACTACACGAACTTCGACGGGAATCCGGTCATTCAGACCAACTC
AACTGCTTGTCTTTTGCTGGGAACTTCAACTCTGGTACTCTGCCTGATCA
TCTCGTTTCTAATGTTCGCCATTCTGCAATGGAAGGCATCTCGGCTGCGA
GGCAGCAAGTCAGTCCAAGGCGGTCCATGTGAATCCTAGAAGCTTTCTAG
ACCAT

BS20145.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:44:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG13538-RA 573 CG13538-PA 1..573 17..589 2865 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:44:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG13538-RA 989 CG13538-RA 87..662 14..589 2880 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:44:30
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23087263..23087838 14..589 2880 100 Plus
Blast to na_te.dros performed 2014-11-26 15:44:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dkoe\Gandalf 979 Dkoe\Gandalf DK29466 979bp Derived from U29466 (Rel. 63, Last updated, Version 5). 44..88 35..79 117 73.3 Plus

BS20145.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:31:13 Download gff for BS20145.complete
Subject Subject Range Query Range Percent Splice Strand
CG13538-RA 5..577 17..589 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:41:53 Download gff for BS20145.complete
Subject Subject Range Query Range Percent Splice Strand
CG13538-RA 90..662 17..589 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:48:09 Download gff for BS20145.complete
Subject Subject Range Query Range Percent Splice Strand
CG13538-RA 90..662 17..589 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:48:09 Download gff for BS20145.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23087266..23087838 17..589 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:41:53 Download gff for BS20145.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18974789..18975361 17..589 100   Plus

BS20145.pep Sequence

Translation from 16 to 588

> BS20145.pep
MMLADEFETMCKNYFVNSMTHVCSSLVPESLTKKYRNRLIIPKDPYSIFK
LNSRNSSYLLAFRFPEMRNCRKLWMSDLRNLNCEIKGGKMKNFFFANSYR
KCYNFAMDLTSELKAHCGAKNNEEDTQSGYYYTNFDGNPVIQTNSTACLL
LGTSTLVLCLIISFLMFAILQWKASRLRGSKSVQGGPCES*

BS20145.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:56:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG13538-PA 190 CG13538-PA 1..190 1..190 1014 100 Plus