BS20146.complete Sequence
800 bp assembled on 2011-01-07
GenBank Submission: KX804539
> BS20146.complete
GAAGTTATCAGTCGACATGCGCTGCGCTGTAAAAAATTGCGGAAATAATA
ATCGTATTGCCAATAGAACGAAATGGAGATACTTTCACTTCCCCAAAGAA
AAGCCAAACCTCCAAAGGTGGATAGATTTTTGCCAGCGAGATAATATAAA
CCCCACAACTGCCTGTATTTGCAATGAGCACTTTGCACCCAATGACTTTG
AGCGAAATATGCAATACGAATTGGGCTTTAGCCGCAAAAATCCAACAAAA
CTAAAGCCCGGCTCATTTCCGAGTGTGAATGGACCCCAAAAGTTGGCGAA
GGAACTGCGAGGAAGTATCAAAAGGGGCTCCAAAAGTGTTCCCTTAGCTG
GGTCTACGAAAATGTCCAATATAGGCTTTGATCCACACCATGCAGGAACG
CAATCCTCGGAAGGCCACGAAACCATAGAAATCCAACTCTGTGGTTTTAA
TACAGATATTGAGGGCTTCGAAGAAGCCGAAGATGACGACTGTCCTTCAG
GTCCCCGGCTCGTGGAAGTAGAAATATTGGATCCTCTTAACCCGCAGTCA
AATGCCAAGGATCATGTGGAGATAATCGATTCGGAAGGCGACAGTTATGT
GAAGCACTTGGAGCTCGAAATATGCTCCTTAAAGCGTGAGGTATTTTTCC
TCAAAGACGAATACCAGAAGATAAAGGCTGAAATGCGTAATCTCAAGGAC
ACAATAAAAAGATCAGAGGAAGAACTCGCAGAAAAACAACTCCAAGGTGT
TGTTAAAAGCAGAAAAAGGAAATCTCAGTTTTGAAAGCTTTCTAGACCAT
BS20146.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:39:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14135-RB | 768 | CG14135-PB | 1..768 | 17..784 | 3840 | 100 | Plus |
CG14135-RC | 780 | CG14135-PC | 1..750 | 17..766 | 3750 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:39:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14135-RB | 937 | CG14135-RB | 48..817 | 17..786 | 3850 | 100 | Plus |
CG14135-RC | 1064 | CG14135-RC | 124..873 | 17..766 | 3750 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:39:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11691895..11692359 | 157..621 | 2310 | 99.8 | Plus |
3L | 28110227 | 3L | 11691694..11691838 | 17..161 | 725 | 100 | Plus |
3L | 28110227 | 3L | 11692422..11692566 | 622..766 | 725 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:39:25 has no hits.
BS20146.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:30:32 Download gff for
BS20146.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14135-RB | 48..814 | 17..783 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:40:51 Download gff for
BS20146.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14135-RB | 48..814 | 17..783 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:46:22 Download gff for
BS20146.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14135-RB | 48..814 | 17..783 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:46:22 Download gff for
BS20146.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11691694..11691838 | 17..161 | 100 | -> | Plus |
3L | 11691900..11692359 | 162..621 | 100 | -> | Plus |
3L | 11692422..11692566 | 622..766 | 100 | -> | Plus |
3L | 11692618..11692634 | 767..783 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:40:51 Download gff for
BS20146.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11684794..11684938 | 17..161 | 100 | -> | Plus |
arm_3L | 11685000..11685459 | 162..621 | 100 | -> | Plus |
arm_3L | 11685522..11685666 | 622..766 | 100 | -> | Plus |
arm_3L | 11685718..11685734 | 767..783 | 100 | | Plus |
BS20146.pep Sequence
Translation from 16 to 783
> BS20146.pep
MRCAVKNCGNNNRIANRTKWRYFHFPKEKPNLQRWIDFCQRDNINPTTAC
ICNEHFAPNDFERNMQYELGFSRKNPTKLKPGSFPSVNGPQKLAKELRGS
IKRGSKSVPLAGSTKMSNIGFDPHHAGTQSSEGHETIEIQLCGFNTDIEG
FEEAEDDDCPSGPRLVEVEILDPLNPQSNAKDHVEIIDSEGDSYVKHLEL
EICSLKREVFFLKDEYQKIKAEMRNLKDTIKRSEEELAEKQLQGVVKSRK
RKSQF*
BS20146.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:56:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14135-PB | 255 | CG14135-PB | 1..255 | 1..255 | 1365 | 100 | Plus |
CG14135-PC | 259 | CG14135-PC | 1..250 | 1..250 | 1340 | 100 | Plus |