Clone BS20147 Report

Search the DGRC for BS20147

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:201
Well:47
Vector:pDNR-Dual
Associated Gene/TranscriptCG14247-RA
Protein status:BS20147.pep: full length peptide match
Sequenced Size:593

Clone Sequence Records

BS20147.complete Sequence

593 bp assembled on 2011-01-07

GenBank Submission: KX800382

> BS20147.complete
GAAGTTATCAGTCGACATGCTCCGTTGGCTGTTCGTGATGAAATTATTTA
TGAAAAATAAATGGAGTAACTTCCCCCGGATTCTGCTCCTGATCCTGATC
CTGACCATGCTGCAGCTGCTGCAGCAGGGTGTGGCAGCCACCACCGACCC
TGACACAACCACGAATGCAACATGCAGACATGCCACGGACATGTGGGGAG
ATCCGGACCCCAACATATTCTACGTGTGCTCCGATGGCGGACAACCGCTG
CAGCTGGAGTGTCCGCCTGGCCGGGGATTTTTCAGCGGTCTCGGTTATCT
GGGCTGTTTGCCCTATGACCACTGGCCAGCCTGCCGCCCCTCGGAGGAGC
AGGTGGCCGCCCAATTGTCAGCTGGCTGTGACACCACTACCGGCATCGTG
CCATCGCCCTGGGCCTCGCCGGATCCCAACCGATTCTACCTGTGTCCCAG
CATAAATGCCACACCTCTGCTGCTCAACTGCGCCGCCGGTAGTGGATTCG
TGTCCAGTTCCGAGGTGGTGGGCTGTGCGGACTGGTCACAATGGCGCCGC
CAGATGGAGTGCGAGGCGTACTACTGAAAGCTTTCTAGACCAT

BS20147.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:39:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG14247-RA 561 CG14247-PA 1..561 17..577 2805 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:39:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG14247-RA 984 CG14247-RA 200..760 17..577 2805 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:39:29
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26737809..26738369 17..577 2805 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:39:30 has no hits.

BS20147.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:30:33 Download gff for BS20147.complete
Subject Subject Range Query Range Percent Splice Strand
CG14247-RA 184..743 17..576 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:40:53 Download gff for BS20147.complete
Subject Subject Range Query Range Percent Splice Strand
CG14247-RA 184..743 17..576 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:46:23 Download gff for BS20147.complete
Subject Subject Range Query Range Percent Splice Strand
CG14247-RA 200..759 17..576 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:46:23 Download gff for BS20147.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26737809..26738368 17..576 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:40:53 Download gff for BS20147.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 22563531..22564090 17..576 100   Plus

BS20147.pep Sequence

Translation from 16 to 576

> BS20147.pep
MLRWLFVMKLFMKNKWSNFPRILLLILILTMLQLLQQGVAATTDPDTTTN
ATCRHATDMWGDPDPNIFYVCSDGGQPLQLECPPGRGFFSGLGYLGCLPY
DHWPACRPSEEQVAAQLSAGCDTTTGIVPSPWASPDPNRFYLCPSINATP
LLLNCAAGSGFVSSSEVVGCADWSQWRRQMECEAYY*

BS20147.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:56:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG14247-PA 186 CG14247-PA 1..186 1..186 1039 100 Plus
CG6403-PB 153 CG6403-PB 1..150 24..182 195 32.5 Plus
CG6403-PA 153 CG6403-PA 1..150 24..182 195 32.5 Plus