BS20148.complete Sequence
542 bp assembled on 2011-01-07
GenBank Submission: KX804215
> BS20148.complete
GAAGTTATCAGTCGACATGAAGCTATTCATTTTGGCTACCTGTCTGCTGG
CTTTTGCAGCCGGTGATGTTTCGCATTTGCCGCTGGAACTCCTGGAGGAG
CATCATGAGCATGGCTATGGCTATGACTACCCCAAGCCGGAGATACCATT
TGTGATTACCTCGACGACGGAGCCACCACCGCCACCACCGACTTATCTGC
CACCCAAACCAGTACCCACTTACCTACCTCCTCCTCCGCCCACAACCACA
ACTACCACCACAACCACTCCGGCTCCTACTCCCGCTCCTACCTACCTTCC
TCCCCCTCCACCTACTACCACTACCACGACAACCACTCCCGCTCCCACTC
CTGCTCCCACTTACCTTCCTCCCCCACCTCCACCACCGCGTACCACTACC
ACCACCACCACTACAACCACAACGACACCTGCACCCACGCCAGTGCCCAC
GTACCTTCCACCCCCACCACCACAACCGGAACCGGGTTACCACTACGATG
TGCCCGCCCAAGAGTTCACCTTCTGAAAGCTTTCTAGACCAT
BS20148.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:39:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15023-RD | 510 | CG15023-PD | 1..510 | 17..526 | 2550 | 100 | Plus |
CG15023-RB | 510 | CG15023-PB | 1..510 | 17..526 | 2550 | 100 | Plus |
CG15023-RC | 507 | CG15023-PC | 3..507 | 22..526 | 2525 | 100 | Plus |
CG15023-RD | 510 | CG15023-PD | 213..290 | 298..375 | 195 | 83.3 | Plus |
CG15023-RB | 510 | CG15023-PB | 213..290 | 298..375 | 195 | 83.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:39:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15023-RD | 819 | CG15023-RD | 186..695 | 17..526 | 2550 | 100 | Plus |
CG15023-RB | 686 | CG15023-RB | 53..562 | 17..526 | 2550 | 100 | Plus |
CG15023-RC | 683 | CG15023-RC | 55..559 | 22..526 | 2525 | 100 | Plus |
CG15023-RD | 819 | CG15023-RD | 398..475 | 298..375 | 195 | 83.3 | Plus |
CG15023-RB | 686 | CG15023-RB | 265..342 | 298..375 | 195 | 83.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:39:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4460746..4461253 | 526..19 | 2540 | 100 | Minus |
3L | 28110227 | 3L | 4460966..4461043 | 375..298 | 195 | 83.3 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:39:40 has no hits.
BS20148.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:30:34 Download gff for
BS20148.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15023-RB | 21..529 | 17..525 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:40:56 Download gff for
BS20148.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15023-RB | 53..561 | 17..525 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:46:27 Download gff for
BS20148.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15023-RB | 53..561 | 17..525 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:46:27 Download gff for
BS20148.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4460747..4461254 | 17..525 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:40:56 Download gff for
BS20148.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4460747..4461254 | 17..525 | 99 | | Minus |
BS20148.pep Sequence
Translation from 16 to 525
> BS20148.pep
MKLFILATCLLAFAAGDVSHLPLELLEEHHEHGYGYDYPKPEIPFVITST
TEPPPPPPTYLPPKPVPTYLPPPPPTTTTTTTTTPAPTPAPTYLPPPPPT
TTTTTTTPAPTPAPTYLPPPPPPPRTTTTTTTTTTTTPAPTPVPTYLPPP
PPQPEPGYHYDVPAQEFTF*
BS20148.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:56:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15023-PD | 169 | CG15023-PD | 1..169 | 1..169 | 965 | 100 | Plus |
CG15023-PB | 169 | CG15023-PB | 1..169 | 1..169 | 965 | 100 | Plus |
CG15023-PC | 168 | CG15023-PC | 2..168 | 3..169 | 955 | 100 | Plus |
CG11345-PA | 242 | CG11345-PA | 1..186 | 1..166 | 295 | 39.2 | Plus |
CG15021-PA | 420 | CG15021-PA | 7..196 | 5..165 | 268 | 34 | Plus |