Clone BS20149 Report

Search the DGRC for BS20149

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:201
Well:49
Vector:pDNR-Dual
Associated Gene/TranscriptCG15471-RB
Protein status:BS20149.pep: gold
Sequenced Size:419

Clone Sequence Records

BS20149.complete Sequence

419 bp assembled on 2011-01-07

GenBank Submission: KX802766

> BS20149.complete
GAAGTTATCAGTCGACATGGCCAGCCTGACGGAAGATCGGGGTCCCAATA
TCTGCAACTGTAGTCGAATGCGATCCGAGTGCTGGACAAGACATTCGATC
ACCGCCGAGGACACGATGACTCGTCTGGCTTTAAAGTACGACACGAGCAT
TGGGCGCATATGCAGGGCCAATCGAATGCACAGCCAGGATGTCCTGCAGG
CACGCCGTCACGTTTGGGTGCCCATTCCAAACAGTCAGTTTCAGATGGGG
TGTCAAGAGAAATCAGAGTCCGACGAAAGTCCGGAGATCTCTATCAGAAA
AGTTACGCCGAACTTGCCGTCACATTTTTATCGCCAAAGCGATCCAAATC
CAAATCCTTTTGCTTGCGATGACGATCCGCTGCTGGTCATCACAGATATG
TAGAAGCTTTCTAGACCAT

BS20149.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:45:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG15471-RC 387 CG15471-PC 1..387 17..403 1935 100 Plus
CG15471-RB 387 CG15471-PB 1..387 17..403 1935 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:45:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG15471-RC 528 CG15471-RC 56..442 17..403 1935 100 Plus
CG15471-RB 535 CG15471-RB 33..419 17..403 1935 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:45:11
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 4782317..4782703 403..17 1935 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:45:12 has no hits.

BS20149.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:31:18 Download gff for BS20149.complete
Subject Subject Range Query Range Percent Splice Strand
CG15471-RC 56..442 17..403 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:42:02 Download gff for BS20149.complete
Subject Subject Range Query Range Percent Splice Strand
CG15471-RB 33..419 17..403 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:48:21 Download gff for BS20149.complete
Subject Subject Range Query Range Percent Splice Strand
CG15471-RB 33..419 17..403 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:48:21 Download gff for BS20149.complete
Subject Subject Range Query Range Percent Splice Strand
X 4782317..4782703 17..403 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:42:02 Download gff for BS20149.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 4676350..4676736 17..403 100   Minus

BS20149.pep Sequence

Translation from 16 to 402

> BS20149.pep
MASLTEDRGPNICNCSRMRSECWTRHSITAEDTMTRLALKYDTSIGRICR
ANRMHSQDVLQARRHVWVPIPNSQFQMGCQEKSESDESPEISIRKVTPNL
PSHFYRQSDPNPNPFACDDDPLLVITDM*

BS20149.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:57:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG15471-PC 128 CG15471-PC 1..128 1..128 696 100 Plus
CG15471-PB 128 CG15471-PB 1..128 1..128 696 100 Plus