BS20150.complete Sequence
488 bp assembled on 2011-01-07
GenBank Submission: KX803484
> BS20150.complete
GAAGTTATCAGTCGACATGCACCCAGGGCAAATTGAGGTCAACGAGATCA
ATGGCTATTGGACATTTCTGCTGAGCATCGATTGGAAGGATCCCTGGCTT
ATTGGCCTTATTTTGGCGCATATCTTAACCACCACCACTGCGCTGCTCAG
CCGGAACAGCTCCAACTTCCAGGTTTTCCTCTTCCTAGTACTGTTGCTGG
CAGTCTACTTCACCGAAAGCATCAATGAGTTCGCTGCTAACAACTGGAGT
TCCTTTTCCAGACAACAATACTTCGATAGCAACGGCCTGTTTATCTCGAC
AGTTTTCTCAATACCTATTTTGCTTAATTGCATGCTTTTGATTGGCACTT
GGCTCTACAACTCCACGCAGCTGATGGTGACTCTAAAAACAGCGCAGCTC
AAGGAGCGAGCTCGCAAGGAACGCCAGACTAAGGCGGATTCGGAATCCAT
AGCACATAAAAAGGCAGAGTAGAAGCTTTCTAGACCAT
BS20150.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:45:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30051-RC | 456 | CG30051-PC | 1..456 | 17..472 | 2280 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:45:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30051-RC | 676 | CG30051-RC | 78..535 | 17..474 | 2290 | 100 | Plus |
| DUBAI-RB | 4024 | CG8830-RB | 1..64 | 258..195 | 320 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:45:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12436514..12436663 | 195..344 | 750 | 100 | Plus |
| 2R | 25286936 | 2R | 12436719..12436849 | 344..474 | 655 | 100 | Plus |
| 2R | 25286936 | 2R | 12436321..12436438 | 77..194 | 590 | 100 | Plus |
| 2R | 25286936 | 2R | 12436197..12436256 | 17..76 | 300 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:45:22 has no hits.
BS20150.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:31:19 Download gff for
BS20150.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30051-RC | 101..556 | 17..472 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:42:03 Download gff for
BS20150.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30051-RC | 78..533 | 17..472 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:48:26 Download gff for
BS20150.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30051-RC | 78..533 | 17..472 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:48:26 Download gff for
BS20150.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12436197..12436256 | 17..76 | 100 | -> | Plus |
| 2R | 12436321..12436438 | 77..194 | 100 | -> | Plus |
| 2R | 12436514..12436662 | 195..343 | 100 | -> | Plus |
| 2R | 12436719..12436847 | 344..472 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:42:03 Download gff for
BS20150.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8323702..8323761 | 17..76 | 100 | -> | Plus |
| arm_2R | 8323826..8323943 | 77..194 | 100 | -> | Plus |
| arm_2R | 8324019..8324167 | 195..343 | 100 | -> | Plus |
| arm_2R | 8324224..8324352 | 344..472 | 100 | | Plus |
BS20150.pep Sequence
Translation from 16 to 471
> BS20150.pep
MHPGQIEVNEINGYWTFLLSIDWKDPWLIGLILAHILTTTTALLSRNSSN
FQVFLFLVLLLAVYFTESINEFAANNWSSFSRQQYFDSNGLFISTVFSIP
ILLNCMLLIGTWLYNSTQLMVTLKTAQLKERARKERQTKADSESIAHKKA
E*
BS20150.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:57:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30051-PC | 151 | CG30051-PC | 1..151 | 1..151 | 777 | 100 | Plus |
