BS20151.complete Sequence
605 bp assembled on 2011-01-07
GenBank Submission: KX802897
> BS20151.complete
GAAGTTATCAGTCGACATGTTGAAGGACACCGCCACCGCATCGACCAGCG
AACTTGCAGGGGAAGTGGGTGACGCCCATTCGACTCCTGGCAGCTGCCCT
CCGCCCGCCGCGGGCGACACGCCCCCCGTCGTTAGCCGACCGCTGGACCG
ACGCCTAAACCCCAACGCACCTGTGTTTGTGCCCGACTTCAAGGCCAGCC
AGGTGGCCAAAAAGCTATTTGATGAGTTATCTACGTACACCCGGTGGAGT
ACGGCAACCTCGGAGGACATATGCTACGAGCCCCGTTACGAGTCCATCTG
GCGTGAGGCCAGCATCCAGCAGCAGCAGGGTCTGCGCCATCCGGGTTTCG
TTTACAGCCTGGATCCTGGCGAGGAGGAGGTTGGCGAACTGGAGTTTGAC
GAAGTCCAGGCCATGAATATCGGAGCCGAGTCCTATGATCCCAAGCTAGG
AAGCACATCAGTTAGCCAGGCAATGGAAGTTCGCGAAACTGTGGGTGATG
TGGAGGAACCTTTAGATGAGGAAAAAAGGAATGGCTTTCAGAATCGCCAC
TCCGCCAGACCGGCCAAAAAGTGCTGTCTGGTCATGTAGAAGCTTTCTAG
ACCAT
BS20151.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:45:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15136-RB | 573 | CG15136-PB | 1..573 | 17..589 | 2865 | 100 | Plus |
| CG15136-RA | 573 | CG15136-PA | 1..573 | 17..589 | 2865 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:45:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15136-RB | 897 | CG15136-RB | 237..810 | 16..589 | 2870 | 100 | Plus |
| CG15136-RA | 747 | CG15136-RA | 87..660 | 16..589 | 2870 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:45:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 17047248..17047609 | 589..228 | 1810 | 100 | Minus |
| 2L | 23513712 | 2L | 17047771..17047982 | 227..16 | 1060 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:45:27 has no hits.
BS20151.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:31:20 Download gff for
BS20151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15136-RA | 93..660 | 22..589 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:42:05 Download gff for
BS20151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15136-RA | 93..660 | 22..589 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:48:28 Download gff for
BS20151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15136-RA | 93..660 | 22..589 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:48:28 Download gff for
BS20151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 17047248..17047609 | 228..589 | 100 | <- | Minus |
| 2L | 17047771..17047976 | 22..227 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:42:05 Download gff for
BS20151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17047248..17047609 | 228..589 | 100 | <- | Minus |
| arm_2L | 17047771..17047976 | 22..227 | 100 | | Minus |
BS20151.pep Sequence
Translation from 16 to 588
> BS20151.pep
MLKDTATASTSELAGEVGDAHSTPGSCPPPAAGDTPPVVSRPLDRRLNPN
APVFVPDFKASQVAKKLFDELSTYTRWSTATSEDICYEPRYESIWREASI
QQQQGLRHPGFVYSLDPGEEEVGELEFDEVQAMNIGAESYDPKLGSTSVS
QAMEVRETVGDVEEPLDEEKRNGFQNRHSARPAKKCCLVM*
BS20151.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:57:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15136-PB | 190 | CG15136-PB | 1..190 | 1..190 | 1001 | 100 | Plus |
| CG15136-PA | 190 | CG15136-PA | 1..190 | 1..190 | 1001 | 100 | Plus |
