BS20152.complete Sequence
374 bp assembled on 2011-01-07
GenBank Submission: KX802500
> BS20152.complete
GAAGTTATCAGTCGACATGTCGAACGGTTTTTCCTTCTGGAACGGACAGC
CAGTGAATGCGCCTATCTTTCCCCAAATGGGTGATGCCATAAACGTTGGT
AGCCAGTGGTCGTCCAGCGTGGCACCAGGATCCTGTGGACCAAGAACTCG
ACCGATGCTGCAGAGCATGGGCGATTTCCAGCCGATGAGATGTCCTCCAG
TGCCACCCAACTTCTTTGGCCAGCCGCACGCCATGGGAACTGGATTTGGA
GATGATCAGGGACCCTGCGAACCCTGCATCGATAATGGAGAAGCCTTCTG
CGCCTACAACGGCTTGGATATGAGCTGTGCCGGGAGAATTAAGGGCGATT
TCTGGTAGAAGCTTTCTAGACCAT
BS20152.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:45:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15200-RA | 342 | CG15200-PA | 1..342 | 17..358 | 1710 | 100 | Plus |
| CG1394-RB | 504 | CG1394-PB | 403..459 | 269..325 | 210 | 91.2 | Plus |
| CG1394-RA | 504 | CG1394-PA | 403..459 | 269..325 | 210 | 91.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:45:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15200-RA | 546 | CG15200-RA | 125..467 | 16..358 | 1715 | 100 | Plus |
| CG1394-RB | 868 | CG1394-RB | 572..628 | 269..325 | 210 | 91.2 | Plus |
| CG1394-RA | 842 | CG1394-RA | 572..628 | 269..325 | 210 | 91.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:45:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11183055..11183397 | 16..358 | 1715 | 100 | Plus |
| X | 23542271 | X | 11170051..11170107 | 325..269 | 210 | 91.2 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:45:37 has no hits.
BS20152.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:31:21 Download gff for
BS20152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15200-RA | 126..467 | 17..358 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:42:07 Download gff for
BS20152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15200-RA | 126..467 | 17..358 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:48:31 Download gff for
BS20152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15200-RA | 126..467 | 17..358 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:48:31 Download gff for
BS20152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11183056..11183397 | 17..358 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:42:07 Download gff for
BS20152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11077089..11077430 | 17..358 | 100 | | Plus |
BS20152.pep Sequence
Translation from 16 to 357
> BS20152.pep
MSNGFSFWNGQPVNAPIFPQMGDAINVGSQWSSSVAPGSCGPRTRPMLQS
MGDFQPMRCPPVPPNFFGQPHAMGTGFGDDQGPCEPCIDNGEAFCAYNGL
DMSCAGRIKGDFW*
BS20152.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:57:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15200-PA | 113 | CG15200-PA | 1..113 | 1..113 | 653 | 100 | Plus |
| CG11106-PB | 112 | CG11106-PB | 4..112 | 3..113 | 139 | 31.5 | Plus |
| CG11106-PA | 112 | CG11106-PA | 4..112 | 3..113 | 139 | 31.5 | Plus |
