BS20154.complete Sequence
611 bp assembled on 2011-01-07
GenBank Submission: KX803547
> BS20154.complete
GAAGTTATCAGTCGACATGGCTGAGAGCTCCAAGGGCATGGAACACACCA
CCAGCTGGTACTGCAAACTTTACAATTCCCTTAAGGAAACACCCATCGAT
GTCACCCTTTTGATCATGTCGATCGTCGTGTTCCTCAAGTTGGGATTTTT
TGCGCGTCGTCTGAGCCGCGAGGAACCAGACTTCAGTGATGATAATAATC
AGGAAGTGGATCTTCCGCCACTGCGGAAGGACTTTACGGTTCGGGAACTT
CGGGAATATGACGGCACACGGGCGGACGGTCGCATCCTAGTGGCCATCCT
TTTCAACATCTACGATGTCTCGCGATCCGTTCACTATTACGGACGAAATG
GCGTTAATCCAAACTATGCCGGTCGGGATATTTCGAGGATTTTGATCAAT
TCACCAGAGGACTTGAAGGACAGCGAGGATTTTGATGATTTGAGCGACCT
CTCACGCAACCAAATGAACACATTACGAGAGTGGGAACAGCGGTACAAGA
TGAAGTACCCATTTGTTGGAAAGCTCAAGGAGAAACTACAAATCAATGAA
GAGGAGGATTTTGAGCTGCAGCAAGCGGATCCGCTGGTGGACTAAAAGCT
TTCTAGACCAT
BS20154.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:45:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16957-RB | 579 | CG16957-PB | 1..579 | 17..595 | 2895 | 100 | Plus |
| CG16957-RA | 579 | CG16957-PA | 1..579 | 17..595 | 2895 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:45:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16957-RB | 778 | CG16957-RB | 84..663 | 17..596 | 2900 | 100 | Plus |
| CG16957-RA | 825 | CG16957-RA | 84..663 | 17..596 | 2900 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:45:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13395522..13396101 | 596..17 | 2900 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:45:42 has no hits.
BS20154.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:31:22 Download gff for
BS20154.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16957-RA | 84..660 | 17..593 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:42:09 Download gff for
BS20154.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16957-RA | 84..660 | 17..593 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:48:34 Download gff for
BS20154.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16957-RA | 84..660 | 17..593 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:48:34 Download gff for
BS20154.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13395525..13396101 | 17..593 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:42:09 Download gff for
BS20154.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13395525..13396101 | 17..593 | 100 | | Minus |
BS20154.pep Sequence
Translation from 16 to 594
> BS20154.pep
MAESSKGMEHTTSWYCKLYNSLKETPIDVTLLIMSIVVFLKLGFFARRLS
REEPDFSDDNNQEVDLPPLRKDFTVRELREYDGTRADGRILVAILFNIYD
VSRSVHYYGRNGVNPNYAGRDISRILINSPEDLKDSEDFDDLSDLSRNQM
NTLREWEQRYKMKYPFVGKLKEKLQINEEEDFELQQADPLVD*
BS20154.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:57:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16957-PB | 192 | CG16957-PB | 1..192 | 1..192 | 1001 | 100 | Plus |
| CG16957-PA | 192 | CG16957-PA | 1..192 | 1..192 | 1001 | 100 | Plus |
| MSBP-PC | 248 | CG9066-PC | 41..197 | 29..183 | 305 | 41.5 | Plus |
| MSBP-PB | 248 | CG9066-PB | 41..197 | 29..183 | 305 | 41.5 | Plus |
| MSBP-PA | 248 | CG9066-PA | 41..197 | 29..183 | 305 | 41.5 | Plus |
