Clone BS20156 Report

Search the DGRC for BS20156

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:201
Well:56
Vector:pDNR-Dual
Associated Gene/TranscriptCG30447-RA
Protein status:BS20156.pep: full length peptide match
Sequenced Size:557

Clone Sequence Records

BS20156.complete Sequence

557 bp assembled on 2011-01-07

GenBank Submission: KX803926

> BS20156.complete
GAAGTTATCAGTCGACATGATGTCGAAAGATTTTGATTTTTCTCAGAAGG
GTATGAGCGACGCCACTAGTAGCGACTTACGTAACGAGTCAGCACATCCA
ACATTCTCTGGGACTAAGCAACTTTTCACGTTAAGCTCGCCGTTTTACCA
GGGACCCACGTCCTTTGGCGGTAGTGCGGCTATTACTCGCGTTTGGAACA
ATTTTAAGTGCAGCAGAATACTTGCTTCTGAAATCAACAAAAAGATGGAA
CCGCCAACTTATTCGGAGTCCTTAGAGTCGAAGATCATGAAACGCCGTCG
TCTGTACGCTCTTTTAAATAGGAAAGAAATTACGTATAGCAAATACCGGA
ATATACAGAATGAGTCCCGGATAGGAATCATTAAAGAGGTGGAGGAAACA
CAAATGCCAGAAACCACATATAAGAAGAAATCGCCTACGAAACCAGTTAT
GCGAACATTCTACTTCTCGGAGCCTATACCGCTAATGCAACATAATTCAA
AGCGCAATTTTGTATTTTCCGACCCAATTCCTCTGGATTAGAAGCTTTCT
AGACCAT

BS20156.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:46:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG30447-RC 525 CG30447-PC 1..525 17..541 2625 100 Plus
CG30447-RB 525 CG30447-PB 1..525 17..541 2625 100 Plus
CG30447-RA 525 CG30447-PA 1..525 17..541 2625 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:46:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG30447-RC 805 CG30447-RC 57..582 16..541 2630 100 Plus
CG30447-RB 808 CG30447-RB 60..585 16..541 2630 100 Plus
CG30447-RA 785 CG30447-RA 37..562 16..541 2630 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:46:01
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19947332..19947857 16..541 2630 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:46:02 has no hits.

BS20156.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:31:24 Download gff for BS20156.complete
Subject Subject Range Query Range Percent Splice Strand
CG30447-RA 40..564 17..541 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:42:12 Download gff for BS20156.complete
Subject Subject Range Query Range Percent Splice Strand
CG30447-RA 40..564 17..541 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:48:41 Download gff for BS20156.complete
Subject Subject Range Query Range Percent Splice Strand
CG30447-RA 38..562 17..541 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:48:41 Download gff for BS20156.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19947333..19947857 17..541 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:42:12 Download gff for BS20156.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15834838..15835362 17..541 100   Plus

BS20156.pep Sequence

Translation from 16 to 540

> BS20156.pep
MMSKDFDFSQKGMSDATSSDLRNESAHPTFSGTKQLFTLSSPFYQGPTSF
GGSAAITRVWNNFKCSRILASEINKKMEPPTYSESLESKIMKRRRLYALL
NRKEITYSKYRNIQNESRIGIIKEVEETQMPETTYKKKSPTKPVMRTFYF
SEPIPLMQHNSKRNFVFSDPIPLD*

BS20156.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:57:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG30447-PC 174 CG30447-PC 1..174 1..174 903 100 Plus
CG30447-PB 174 CG30447-PB 1..174 1..174 903 100 Plus
CG30447-PA 174 CG30447-PA 1..174 1..174 903 100 Plus