BS20157.complete Sequence
593 bp assembled on 2011-01-07
GenBank Submission: KX800559
> BS20157.complete
GAAGTTATCAGTCGACATGGATTTGTTTAGCTCTCTGCTGCTGTGCCTGG
GAATTATTTCATTACCCAATGTGTTTACGATTTGCATTCCGCCCAATCAC
TGCATTGAAGATATGGAGGAAAGCGATGCGAAAGAGCGATTCGACTATGT
ACTTGGCAAATATGAGGAGGTGGAAATGAATATTCCCGGAAAACCAGTTG
GTTTGTATGGGAAAGTGGTTACGCATGGCGAGGCGGAGGAGCAGCACTTG
GTGTTCCAGTACATGGACAATACGCTGCATGACATCATCCAGACGTGTGC
GTTTGTGGTCAAGCGGAATCCCGGTGAGTGCGAGAACATCCGCACCTACT
GCTCGGCCTTTCTGAGCCGCCTGCCACGCCCCCTGCTGGAGCGCAAGCCC
ATCAACGTGTGTGACGATGGGACGCGAGTGGCGGAGGACGAGCCGGAAAC
GGAAGCGGAAGACAATCCGGATGCAGATGCTGAGGGGGAGACTGATCCGC
AGCAGGAGCAGGGAGTTGGTCAAGCGGAGACCACAACAGCGGAGCCGGCT
AGCTCCAAATTAAGTGAATTTTATTGAAAGCTTTCTAGACCAT
BS20157.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:46:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14854-RB | 561 | CG14854-PB | 1..561 | 17..577 | 2805 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:46:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14854-RB | 663 | CG14854-RB | 7..568 | 16..577 | 2810 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:46:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14559261..14559637 | 577..201 | 1885 | 100 | Minus |
| 3R | 32079331 | 3R | 14559702..14559790 | 201..113 | 445 | 100 | Minus |
| 3R | 32079331 | 3R | 14559991..14560048 | 73..16 | 290 | 100 | Minus |
| 3R | 32079331 | 3R | 14559896..14559935 | 112..73 | 200 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:46:13 has no hits.
BS20157.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:31:26 Download gff for
BS20157.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14854-RB | 8..567 | 17..576 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:42:14 Download gff for
BS20157.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14854-RB | 8..567 | 17..576 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:48:45 Download gff for
BS20157.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14854-RB | 8..567 | 17..576 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:48:45 Download gff for
BS20157.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14559262..14559636 | 202..576 | 100 | <- | Minus |
| 3R | 14559702..14559790 | 113..201 | 100 | <- | Minus |
| 3R | 14559896..14559934 | 74..112 | 100 | <- | Minus |
| 3R | 14559991..14560047 | 17..73 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:42:14 Download gff for
BS20157.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10384984..10385358 | 202..576 | 100 | <- | Minus |
| arm_3R | 10385424..10385512 | 113..201 | 100 | <- | Minus |
| arm_3R | 10385618..10385656 | 74..112 | 100 | <- | Minus |
| arm_3R | 10385713..10385769 | 17..73 | 100 | | Minus |
BS20157.pep Sequence
Translation from 16 to 576
> BS20157.pep
MDLFSSLLLCLGIISLPNVFTICIPPNHCIEDMEESDAKERFDYVLGKYE
EVEMNIPGKPVGLYGKVVTHGEAEEQHLVFQYMDNTLHDIIQTCAFVVKR
NPGECENIRTYCSAFLSRLPRPLLERKPINVCDDGTRVAEDEPETEAEDN
PDADAEGETDPQQEQGVGQAETTTAEPASSKLSEFY*
BS20157.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:57:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14854-PB | 186 | CG14854-PB | 1..186 | 1..186 | 990 | 100 | Plus |
