Clone BS20158 Report

Search the DGRC for BS20158

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:201
Well:58
Vector:pDNR-Dual
Associated Gene/TranscriptCG15124-RA
Protein status:BS20158.pep: full length peptide match
Sequenced Size:608

Clone Sequence Records

BS20158.complete Sequence

608 bp assembled on 2011-01-07

GenBank Submission: KX803286

> BS20158.complete
GAAGTTATCAGTCGACATGGATAACGACAATATGCTCGACTTTACAGACT
TAATCAGCTGCAAGGACTTACCGAACATAACTCTGCACAATATCCGTCCC
ATTTACAGTATAAAGGTTTTCATGTCCGAACCTAAAAACTCCAATGTCTC
TATTGCTGAATTAATCAAACGCCAGGAAGTGTCTGCAGAGCAATGTCGCA
AGGCACTTAAAGTCATAAAGGACAGACTTCTTCTGAAAATGGCAGCGTTG
CAAGAGCTTAAGAAGTATCTGCTGGATTTGCATTCGGAGATCAAAAAGCC
CGGTGCAGGGACTCGTTTTGTGACCAATCAGGAGAAAGTTAAATTGCATT
TCCTAGACGAGACGGAAATCAGAGAAGTCGAATTGTCTGACGCCGTAGAA
CGTTGCAATATAAAGCTGAGCTCGCTTTATTGCGAAATCCTGGCTTTGGA
CAGCGACATGGGCAGTGTCGCCTATTTGGAGAGGGTCGCCCAGATCAACA
AAGACTTTATCATGGATTGGCATAAGACTCAGAGGCAGAATAAGACAAGC
AACATCCATTGTTCCGGCCAAGGCGTCAAAAAGACTTTTTAAAAGCTTTC
TAGACCAT

BS20158.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:44:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG15124-RA 576 CG15124-PA 1..576 17..592 2880 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:44:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG15124-RA 752 CG15124-RA 92..667 17..592 2880 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:44:39
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19643038..19643613 17..592 2880 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:44:40 has no hits.

BS20158.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:31:14 Download gff for BS20158.complete
Subject Subject Range Query Range Percent Splice Strand
CG15124-RA 92..665 17..590 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:41:56 Download gff for BS20158.complete
Subject Subject Range Query Range Percent Splice Strand
CG15124-RA 92..665 17..590 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:48:11 Download gff for BS20158.complete
Subject Subject Range Query Range Percent Splice Strand
CG15124-RA 92..665 17..590 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:48:11 Download gff for BS20158.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19643038..19643611 17..590 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:41:56 Download gff for BS20158.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15530543..15531116 17..590 100   Plus

BS20158.pep Sequence

Translation from 16 to 591

> BS20158.pep
MDNDNMLDFTDLISCKDLPNITLHNIRPIYSIKVFMSEPKNSNVSIAELI
KRQEVSAEQCRKALKVIKDRLLLKMAALQELKKYLLDLHSEIKKPGAGTR
FVTNQEKVKLHFLDETEIREVELSDAVERCNIKLSSLYCEILALDSDMGS
VAYLERVAQINKDFIMDWHKTQRQNKTSNIHCSGQGVKKTF*

BS20158.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:56:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG15124-PA 191 CG15124-PA 1..191 1..191 975 100 Plus