BS20159.complete Sequence
653 bp assembled on 2011-01-07
GenBank Submission: KX805539
> BS20159.complete
GAAGTTATCAGTCGACATGGCTTGGGTTCCCACATCACGATTCGAGCACG
ATCTGGTGCAGTTGGAGCCGCACTTTAATCTGGTCCATGGACAGATCGCC
TATGAACTGAGGAAGAAAGAGGAATTCTCAGAATCCGTTCCCATTCATAC
CTATGAGCTTTTGACAGCCCGCGAGGATCTGCTTGGATATGGCACGCGGG
GTGGAAAGGGCCGAGAGATTCGTCAAAGTCTGCAAATGATGGAGACGATT
CAGAGAGTAGCTGGCACCAAGCCGCTGGGAGAGCACGCCACAATGGAGGA
CTGGGAGGACACCACAATGGTGGACGTGGAGGCGATTGCCATCATCCGGA
ACTTCGGAAGAATGACCCTGAAACAGGACTCACTGACACTCCAGCCGCAG
ATCAGCTTACCTGCGGTTGCTCCAAATGAAAGCCAGCGATTTCCTTTAAT
CACAGATCGCGACTTCTTCACGCCACGAAAGATTCGTAGACCAAAGGATC
TTCCGCCAGTGGAGAACAGTCCGGATAACTCAGCCGATGACTCATTTCAC
ACCGCTAAAAGTCTGAGCAACTGCATCTGGCTGAACGGATTAAAATATCC
AGATAAGACCAGCAAGGGCGAAATTCAGAATACATAGAAGCTTTCTAGAC
CAT
BS20159.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:44:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15484-RA | 621 | CG15484-PA | 1..621 | 17..637 | 3105 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:44:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15484-RA | 913 | CG15484-RA | 182..804 | 16..638 | 3115 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:44:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12706908..12707530 | 638..16 | 3115 | 100 | Minus |
| 2L | 23513712 | 2L | 22391702..22391755 | 322..269 | 210 | 92.6 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:44:44 has no hits.
BS20159.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:31:15 Download gff for
BS20159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15484-RA | 62..682 | 17..637 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:41:58 Download gff for
BS20159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15484-RA | 183..803 | 17..637 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:48:12 Download gff for
BS20159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15484-RA | 183..803 | 17..637 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:48:12 Download gff for
BS20159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12706909..12707529 | 17..637 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:41:58 Download gff for
BS20159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12706909..12707529 | 17..637 | 100 | | Minus |
BS20159.pep Sequence
Translation from 16 to 636
> BS20159.pep
MAWVPTSRFEHDLVQLEPHFNLVHGQIAYELRKKEEFSESVPIHTYELLT
AREDLLGYGTRGGKGREIRQSLQMMETIQRVAGTKPLGEHATMEDWEDTT
MVDVEAIAIIRNFGRMTLKQDSLTLQPQISLPAVAPNESQRFPLITDRDF
FTPRKIRRPKDLPPVENSPDNSADDSFHTAKSLSNCIWLNGLKYPDKTSK
GEIQNT*
BS20159.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:57:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15484-PA | 206 | CG15484-PA | 1..206 | 1..206 | 1082 | 100 | Plus |
| squ-PC | 241 | CG4711-PC | 1..181 | 1..182 | 457 | 49.7 | Plus |
| squ-PB | 241 | CG4711-PB | 1..181 | 1..182 | 457 | 49.7 | Plus |
| squ-PA | 241 | CG4711-PA | 1..181 | 1..182 | 457 | 49.7 | Plus |
