BS20161.complete Sequence
623 bp assembled on 2011-01-07
GenBank Submission: KX804567
> BS20161.complete
GAAGTTATCAGTCGACATGATGAGTGAAGAAGTAATTGCTAAGAACATTT
CCTTGTCAAGTCTTACCTACCCAAAGCGTATACCAAAGATTAAGTTCGGT
CCTATCAAGGACGAAATGGGTTTCACGCTCAGCGAAAGATTGGCCCTCAG
ACAGGCGTGGAACTTGGTCAGACCCTTTGAGCGGCGCTACGGTCAGGACG
TATTCTATAGCTTCCTAAATGATTACTATTGGGGTATTAAGAAGTTCCGG
AACGGAGCTGAGCTCAACGTGAAAGCCCTGCACTCGCATGCCCTGCGATT
TATTAACTTTTTTGGACTTCTAATCGAGGAGAAGGATCCAGTAGTGTTCC
AGCTGATGATAAACGACAACAACCATACCCACAATCGCTGCCATGTGGGC
TCCGTTAATATTGGGCATCTGGCCCAGGCCCTGGTGGACTATGTGCTAAA
GGTGTTCCATAAGGTCAGCTCTCCATCGCTGGAACAGGGTTTGAGCAAAC
TCGTGGAGAAGTTTCAGAACTACCAGGACCAGCAGTCGAATACCTCCGGA
TACAATCGCCTGAGCAAGGTTAACTTTGATTCACGACCGCCCAGAGGTAA
CCCATAGAAGCTTTCTAGACCAT
BS20161.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:46:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| glob3-RA | 591 | CG14675-PA | 1..591 | 17..607 | 2955 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:46:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| glob3-RA | 1118 | CG14675-RA | 93..683 | 17..607 | 2955 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:46:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5830393..5830599 | 209..415 | 1035 | 100 | Plus |
| 3R | 32079331 | 3R | 5830154..5830347 | 17..210 | 970 | 100 | Plus |
| 3R | 32079331 | 3R | 5831158..5831350 | 415..607 | 965 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 15:46:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GATE | 8507 | GATE DME010298 8507bp Derived from AJ010298 (e1315889) (Rel. 56, Last updated, Version 1). | 1021..1052 | 75..106 | 106 | 81.2 | Plus |
BS20161.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:31:30 Download gff for
BS20161.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glob3-RA | 93..683 | 17..607 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:42:22 Download gff for
BS20161.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glob3-RA | 93..683 | 17..607 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:48:55 Download gff for
BS20161.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glob3-RA | 93..683 | 17..607 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:48:55 Download gff for
BS20161.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5830154..5830347 | 17..210 | 100 | -> | Plus |
| 3R | 5830395..5830599 | 211..415 | 100 | -> | Plus |
| 3R | 5831159..5831350 | 416..607 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:42:22 Download gff for
BS20161.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1655876..1656069 | 17..210 | 100 | -> | Plus |
| arm_3R | 1656117..1656321 | 211..415 | 100 | -> | Plus |
| arm_3R | 1656881..1657072 | 416..607 | 100 | | Plus |
BS20161.pep Sequence
Translation from 16 to 606
> BS20161.pep
MMSEEVIAKNISLSSLTYPKRIPKIKFGPIKDEMGFTLSERLALRQAWNL
VRPFERRYGQDVFYSFLNDYYWGIKKFRNGAELNVKALHSHALRFINFFG
LLIEEKDPVVFQLMINDNNHTHNRCHVGSVNIGHLAQALVDYVLKVFHKV
SSPSLEQGLSKLVEKFQNYQDQQSNTSGYNRLSKVNFDSRPPRGNP*
BS20161.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:57:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| glob3-PA | 196 | CG14675-PA | 1..196 | 1..196 | 1031 | 100 | Plus |
| glob2-PB | 222 | CG15180-PB | 35..189 | 18..169 | 228 | 35.5 | Plus |
| glob2-PC | 219 | CG15180-PC | 35..184 | 18..164 | 227 | 36 | Plus |
| glob2-PD | 209 | CG15180-PD | 35..176 | 18..169 | 197 | 32.3 | Plus |
