BS20162.complete Sequence
650 bp assembled on 2011-01-07
GenBank Submission: KX802261
> BS20162.complete
GAAGTTATCAGTCGACATGGCCGAGCAGCATTATAATGCAAATGATTTGG
CTTCCGATCCAAATTCGCGTAAATTGAAGTTTGCCGGCATTTGCAAACTA
AATAATAACGAGCTGTCGAGTCTCTACAATATCGACAAGTTGACCGACGA
GGAGCTGGCGTCCGTGAATCTGGATAGGAGCTCCCTGATCGATGACTATC
GTCTACTGCACGAGGTGTCGCAGATGAAGCAAATAGAGAATGAAGCAAAT
AATATCCCTGCTGCTGCTCCAGCAGGACAACCAAAATCCAAGGAGTTGCA
TGAGCAATTCGTAAAAGAGATGGAGAAGTACCTTACCAATAAGAAGTACA
CATTTCCGATGCTCAACCATTTGATCAAGTTAATGAGTTGGGAAGTGGAG
CCGGAGACCATTTTCAACGAAAAGGCGTTTCAGATTGATGTCAATTACCA
TGAGGACGAGGAGGTAATGCAGCTGGAGCCCAATGAGCGTCTGTTTCGTC
GCCTCAAGTCCATCTACGATCATCTGGAGGACATGTTCATCAACGGCAAT
CGCAGAACGGCCTCCGACCTGGTCTTCACCGCAATTATCCGTTTGGTCGA
CCGCTCTAATGTGGCAAAATATAAAATCATATAAAAGCTTTCTAGACCAT
BS20162.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:46:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14708-RA | 618 | CG14708-PA | 1..618 | 17..634 | 3090 | 100 | Plus |
CG15375-RB | 702 | CG15375-PB | 43..224 | 65..246 | 385 | 80.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:46:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14708-RA | 725 | CG14708-RA | 45..662 | 17..634 | 3090 | 100 | Plus |
CG15375-RB | 1232 | CG15375-RB | 133..314 | 65..246 | 385 | 80.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:46:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11554189..11554806 | 17..634 | 3090 | 100 | Plus |
X | 23542271 | X | 4101450..4101631 | 65..246 | 385 | 80.8 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:46:49 has no hits.
BS20162.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:31:31 Download gff for
BS20162.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14708-RA | 45..660 | 17..632 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:42:25 Download gff for
BS20162.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14708-RA | 45..660 | 17..632 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:48:58 Download gff for
BS20162.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14708-RA | 45..660 | 17..632 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:48:58 Download gff for
BS20162.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11554189..11554804 | 17..632 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:42:25 Download gff for
BS20162.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 7379911..7380526 | 17..632 | 100 | | Plus |
BS20162.pep Sequence
Translation from 16 to 633
> BS20162.pep
MAEQHYNANDLASDPNSRKLKFAGICKLNNNELSSLYNIDKLTDEELASV
NLDRSSLIDDYRLLHEVSQMKQIENEANNIPAAAPAGQPKSKELHEQFVK
EMEKYLTNKKYTFPMLNHLIKLMSWEVEPETIFNEKAFQIDVNYHEDEEV
MQLEPNERLFRRLKSIYDHLEDMFINGNRRTASDLVFTAIIRLVDRSNVA
KYKII*
BS20162.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:57:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14708-PA | 205 | CG14708-PA | 1..205 | 1..205 | 1054 | 100 | Plus |
CG15375-PB | 233 | CG15375-PB | 2..167 | 4..193 | 371 | 46.8 | Plus |