BS20165.complete Sequence
599 bp assembled on 2011-01-07
GenBank Submission: KX800732
> BS20165.complete
GAAGTTATCAGTCGACATGATTGCCCAGACTCTGTTCGTTTTGGGACTGA
TCCTGTCCGCCGTTGTGGCCATTCCCATTGATCCCTATGGACTTTCGGCC
CCTGGACTCACCTATGCGGCTCCCAAGTTGCTTGCTGCTCCTGCCATTTC
CTATGCTGCTCCCAAACTCCTGGCGGCTCCTGCCATCTCGTATGCCGCTC
CTGCCATCTCCTATGCTCCCAAGGTCCTGGCTGCCCCCGTCGCTGTGGCC
AAGGTGGCTGTTGCCGAGCCCTACGATCCCAATCCGCAGTACAGCTTCTC
GTACGGAGTAACCGATCATCACACCGGTGACTCCAAGCAGCAGGAGGAGA
CCCTGGTCAACGGAGTCGTCCACGGCAGCTACTCCCTGGCCGAACCCGAT
GGCACTATTCGCAAGGTCACCTACACCGCCGACAAGGTCAACGGATTCAA
TGCGGTCGTGGAGAAGAAGGGCGTGGCCGCGGTGGCCATTGCCAAGCCAG
CTCTTGCCGTCGCCGCCGTTCCCGCCATCACCAAGATTGGATACGCTTCG
GCGCCTGGTCTGAGTCTGGGTGGATACCACTAGAAGCTTTCTAGACCAT
BS20165.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:47:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr64Ac-RA | 567 | CG15008-PA | 1..567 | 17..583 | 2835 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:47:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr64Ac-RA | 890 | CG15008-RA | 38..609 | 12..583 | 2845 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:47:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4212245..4212803 | 583..25 | 2795 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:47:13 has no hits.
BS20165.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:31:35 Download gff for
BS20165.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr64Ac-RA | 43..609 | 17..583 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:42:30 Download gff for
BS20165.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr64Ac-RA | 43..609 | 17..583 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:49:08 Download gff for
BS20165.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr64Ac-RA | 43..609 | 17..583 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:49:08 Download gff for
BS20165.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4212245..4212803 | 25..583 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:42:30 Download gff for
BS20165.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4212245..4212803 | 25..583 | 100 | | Minus |
BS20165.pep Sequence
Translation from 16 to 582
> BS20165.pep
MIAQTLFVLGLILSAVVAIPIDPYGLSAPGLTYAAPKLLAAPAISYAAPK
LLAAPAISYAAPAISYAPKVLAAPVAVAKVAVAEPYDPNPQYSFSYGVTD
HHTGDSKQQEETLVNGVVHGSYSLAEPDGTIRKVTYTADKVNGFNAVVEK
KGVAAVAIAKPALAVAAVPAITKIGYASAPGLSLGGYH*
BS20165.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:57:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr64Ac-PA | 188 | CG15008-PA | 1..188 | 1..188 | 940 | 100 | Plus |
| Cpr64Aa-PA | 192 | CG15006-PA | 2..139 | 35..171 | 285 | 48.2 | Plus |
| Cpr64Ad-PB | 247 | CG1259-PB | 89..235 | 33..180 | 276 | 48.3 | Plus |
| Ccp84Ab-PA | 221 | CG1252-PA | 9..156 | 39..182 | 271 | 46.1 | Plus |
| Ccp84Aa-PA | 205 | CG2360-PA | 9..156 | 39..182 | 269 | 46.1 | Plus |
