BS20174.complete Sequence
482 bp assembled on 2011-01-07
GenBank Submission: KX801341
> BS20174.complete
GAAGTTATCAGTCGACATGTACAATCGCCACATCGCCCACTTATCGGCCG
TGCAGGCCAACGATACGCGCCATAATGCCACGCTGCGTTTCCAGAGTCGT
CCCACGGATAACGTCTACTCGGATCCACGCCTCGAGCAACTGATTGTCTA
TCGGGCTTTGTTGCAGCACCTGCTGCAACAGAAGGATCACTATGATCACG
AACGGGAGCTGGAACTCCAGCGTCTCGAGCGCTTTCGCAGCGAGGGAGCC
AACGAGCGCCGTTTGCAGATCCAGGAGCAAGTGCTCAAAAAGGCACAGGG
CATGCTGCCTGGCATCGTTTTCAAAATGCGCAACGAGGTGGACAAGCTGA
AGCGCTTCCTCGACATCGACAAGCAGCAGGAGCTGCGCCAACTGGACACC
GCCCTCTACGACAACTGCGTCGAGCTACTCAATAACTGTCAATCTTCTCT
GGAAAACATTAATTGAAAGCTTTCTAGACCAT
BS20174.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:47:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9072-RA | 450 | CG9072-PA | 1..450 | 17..466 | 2250 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:47:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9072-RA | 585 | CG9072-RA | 83..533 | 16..466 | 2255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:47:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15095510..15095960 | 466..16 | 2255 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:47:47 has no hits.
BS20174.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:31:42 Download gff for
BS20174.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9072-RA | 75..523 | 17..465 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:42:43 Download gff for
BS20174.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9072-RA | 84..532 | 17..465 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:49:18 Download gff for
BS20174.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9072-RA | 84..532 | 17..465 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:49:18 Download gff for
BS20174.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15095511..15095959 | 17..465 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:42:43 Download gff for
BS20174.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 14989544..14989992 | 17..465 | 100 | | Minus |
BS20174.pep Sequence
Translation from 16 to 465
> BS20174.pep
MYNRHIAHLSAVQANDTRHNATLRFQSRPTDNVYSDPRLEQLIVYRALLQ
HLLQQKDHYDHERELELQRLERFRSEGANERRLQIQEQVLKKAQGMLPGI
VFKMRNEVDKLKRFLDIDKQQELRQLDTALYDNCVELLNNCQSSLENIN*
BS20174.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:57:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9072-PA | 149 | CG9072-PA | 1..149 | 1..149 | 766 | 100 | Plus |
CG1890-PA | 110 | CG1890-PA | 2..109 | 35..146 | 140 | 29.5 | Plus |