Clone BS20174 Report

Search the DGRC for BS20174

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:201
Well:74
Vector:pDNR-Dual
Associated Gene/TranscriptCG9072-RA
Protein status:BS20174.pep: full length peptide match
Sequenced Size:482

Clone Sequence Records

BS20174.complete Sequence

482 bp assembled on 2011-01-07

GenBank Submission: KX801341

> BS20174.complete
GAAGTTATCAGTCGACATGTACAATCGCCACATCGCCCACTTATCGGCCG
TGCAGGCCAACGATACGCGCCATAATGCCACGCTGCGTTTCCAGAGTCGT
CCCACGGATAACGTCTACTCGGATCCACGCCTCGAGCAACTGATTGTCTA
TCGGGCTTTGTTGCAGCACCTGCTGCAACAGAAGGATCACTATGATCACG
AACGGGAGCTGGAACTCCAGCGTCTCGAGCGCTTTCGCAGCGAGGGAGCC
AACGAGCGCCGTTTGCAGATCCAGGAGCAAGTGCTCAAAAAGGCACAGGG
CATGCTGCCTGGCATCGTTTTCAAAATGCGCAACGAGGTGGACAAGCTGA
AGCGCTTCCTCGACATCGACAAGCAGCAGGAGCTGCGCCAACTGGACACC
GCCCTCTACGACAACTGCGTCGAGCTACTCAATAACTGTCAATCTTCTCT
GGAAAACATTAATTGAAAGCTTTCTAGACCAT

BS20174.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:47:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG9072-RA 450 CG9072-PA 1..450 17..466 2250 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:47:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG9072-RA 585 CG9072-RA 83..533 16..466 2255 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:47:46
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15095510..15095960 466..16 2255 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:47:47 has no hits.

BS20174.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:31:42 Download gff for BS20174.complete
Subject Subject Range Query Range Percent Splice Strand
CG9072-RA 75..523 17..465 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:42:43 Download gff for BS20174.complete
Subject Subject Range Query Range Percent Splice Strand
CG9072-RA 84..532 17..465 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:49:18 Download gff for BS20174.complete
Subject Subject Range Query Range Percent Splice Strand
CG9072-RA 84..532 17..465 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:49:18 Download gff for BS20174.complete
Subject Subject Range Query Range Percent Splice Strand
X 15095511..15095959 17..465 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:42:43 Download gff for BS20174.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 14989544..14989992 17..465 100   Minus

BS20174.pep Sequence

Translation from 16 to 465

> BS20174.pep
MYNRHIAHLSAVQANDTRHNATLRFQSRPTDNVYSDPRLEQLIVYRALLQ
HLLQQKDHYDHERELELQRLERFRSEGANERRLQIQEQVLKKAQGMLPGI
VFKMRNEVDKLKRFLDIDKQQELRQLDTALYDNCVELLNNCQSSLENIN*

BS20174.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:57:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG9072-PA 149 CG9072-PA 1..149 1..149 766 100 Plus
CG1890-PA 110 CG1890-PA 2..109 35..146 140 29.5 Plus