BS20175.complete Sequence
569 bp assembled on 2011-01-07
GenBank Submission: KX805720
> BS20175.complete
GAAGTTATCAGTCGACATGGAGGCATCGTTTATGGTTGCCCTGTTCCTTT
CGTTATTTTTCCACTGCACAGGACTGGTCCCGAGTCCCGTGGAAGCAAGA
CCGGATTCGCTTCTCTTCTTACTTATCGCCATAATCTTTCTGCATAAATT
GAAGATGAAGTACGGGCCAATTCTTCCAGAAACCATAACGGGAGCAATCC
TCGAGGTTCCGGTCCTATGTTTGGCTCTCCAGGTGGCTTTGCTAGTCCTT
TGGGGGCCCATGTTTTATATCCTGCAATGGTTGGTGGATTCTGCCAGCAG
AAATCTGAGATATTGTCTGAATGAGCAACTCTCCTTGATGGTAAAGGATA
TCACTCCGCTTATACTGACAATGGTTCTTATGGCTGTGGAATCGGCTGTG
TTTCTCAACTGTTTCCAGATCAGCGATATGCAGAAGTTCTTTGGCTGCAA
GGAAGACTGCGTCACACCCAGTGTCCTTTCATTTATAGCCGAGGAAGAGA
CCAAGATGTTAAAACGGGACATAAGAAAGTGGAAAAAAACCCACAAGAAG
TGAAAGCTTTCTAGACCAT
BS20175.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:47:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31949-RA | 537 | CG31949-PA | 1..537 | 17..553 | 2685 | 100 | Plus |
| CG31949-RB | 459 | CG31949-PB | 1..324 | 17..340 | 1620 | 100 | Plus |
| CG31949-RB | 459 | CG31949-PB | 324..459 | 418..553 | 680 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:47:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31949-RA | 693 | CG31949-RA | 79..616 | 17..554 | 2690 | 100 | Plus |
| CG31949-RB | 708 | CG31949-RB | 79..402 | 17..340 | 1620 | 100 | Plus |
| CG31949-RB | 708 | CG31949-RB | 402..538 | 418..554 | 685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:47:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2300181..2300718 | 17..554 | 2690 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:47:51 has no hits.
BS20175.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:31:43 Download gff for
BS20175.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31949-RA | 79..614 | 17..552 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:42:44 Download gff for
BS20175.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31949-RA | 79..614 | 17..552 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:49:20 Download gff for
BS20175.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31949-RA | 79..614 | 17..552 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:49:20 Download gff for
BS20175.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2300181..2300716 | 17..552 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:42:44 Download gff for
BS20175.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2300181..2300716 | 17..552 | 100 | | Plus |
BS20175.pep Sequence
Translation from 16 to 552
> BS20175.pep
MEASFMVALFLSLFFHCTGLVPSPVEARPDSLLFLLIAIIFLHKLKMKYG
PILPETITGAILEVPVLCLALQVALLVLWGPMFYILQWLVDSASRNLRYC
LNEQLSLMVKDITPLILTMVLMAVESAVFLNCFQISDMQKFFGCKEDCVT
PSVLSFIAEEETKMLKRDIRKWKKTHKK*
BS20175.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:57:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31949-PA | 178 | CG31949-PA | 1..178 | 1..178 | 913 | 100 | Plus |
| CG31949-PB | 152 | CG31949-PB | 1..152 | 1..178 | 749 | 85.4 | Plus |
