BS20178.complete Sequence
488 bp assembled on 2011-01-07
GenBank Submission: KX800762
> BS20178.complete
GAAGTTATCAGTCGACATGAGCAACAAGAAATCAAAGTTGGTGCAATCGC
TGGAGGAGTCGACGCCGCCCATCGATGAAGAGGACGTCATCCGCTTGATT
GCTGACCAAATTCGCCAGCCTACGAGCGATCCAGTTGATATTAATTTAAG
CAACAAGGAGAATCTAAGCATTCTGCATCTCGAGGATGCCTTTAAATTCA
AAAATTCGATGCAAAGCTTTCACGTGTCGCCCACTGCTGAATCCTTAAAC
GAAGTCATGCCAGTGAAGGACGAGGATCTGGGCGAGATGCTGGATGCCCT
GACCGACGTGATCCTGGTTGAGGAAGACGATGAGGACGATGGCGATGATG
ATGATTATGAAGAAGAAGAGGAAGATGGTGACGACGAAGAGAATGAATTC
GATGAAGAGGACGCGGATGATGTCGACGAAAATGCTCCAAAAGCGAACTT
AAATTCAGGCTGGATATTTTAAAAGCTTTCTAGACCAT
BS20178.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:48:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31806-RB | 456 | CG31806-PB | 1..456 | 17..472 | 2280 | 100 | Plus |
CG31806-RA | 456 | CG31806-PA | 1..456 | 17..472 | 2280 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:48:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31806-RB | 657 | CG31806-RB | 101..558 | 17..474 | 2290 | 100 | Plus |
CG31806-RA | 606 | CG31806-RA | 101..558 | 17..474 | 2290 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:48:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16985078..16985535 | 17..474 | 2290 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 15:48:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
opus | 7521 | opus OPUS 7521bp | 1596..1694 | 275..370 | 126 | 64 | Plus |
BS20178.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:31:45 Download gff for
BS20178.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31806-RA | 25..478 | 17..470 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:42:48 Download gff for
BS20178.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31806-RA | 101..554 | 17..470 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:49:26 Download gff for
BS20178.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31806-RA | 101..554 | 17..470 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:49:26 Download gff for
BS20178.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16985078..16985531 | 17..470 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:42:48 Download gff for
BS20178.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16985078..16985531 | 17..470 | 100 | | Plus |
BS20178.pep Sequence
Translation from 16 to 471
> BS20178.pep
MSNKKSKLVQSLEESTPPIDEEDVIRLIADQIRQPTSDPVDINLSNKENL
SILHLEDAFKFKNSMQSFHVSPTAESLNEVMPVKDEDLGEMLDALTDVIL
VEEDDEDDGDDDDYEEEEEDGDDEENEFDEEDADDVDENAPKANLNSGWI
F*
BS20178.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:57:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31806-PB | 151 | CG31806-PB | 1..151 | 1..151 | 779 | 100 | Plus |
CG31806-PA | 151 | CG31806-PA | 1..151 | 1..151 | 779 | 100 | Plus |