BS20182.complete Sequence
743 bp assembled on 2011-01-07
GenBank Submission: KX803452
> BS20182.complete
GAAGTTATCAGTCGACATGGACACACGCTTGCTGACTGCACTATTGCTGA
TCGCGGCTTGCAGGGCCGAGGATCCAGATTTGGGTCAGGATCAGGATCAG
GCGAAGATCACGTTTAAGCCGGGCCGATATGTGCCACGCCTGCACGGTGC
CACGGGTTGGTATGTTCCGGATGATAGTGGAAAGTACCGGCACGATCCCA
GGCCCTATGACGGCGGCTATGGAGATCGTGGTGTTCCCTATGACTCCGAT
TTGAGCGGCATTTTCCGGAATGCCCAGCGCCAACTGGAGGCAAAGGTCCA
GGAGGCCGGTGAAGGTCTATCCCTCGGTCCACGAGATCATCTGCGATTCA
TGATCGACTTTAATTTCAATGGCACCGGCTGGCAGATAATCCAGTTTCAA
TGGGTACGAGATGGCGATGAGTCCCATCCAGACACCAAGGAGTACAGCTA
CTTGACGGAGAACAAGCTATGGGACTCGGATCAGGCCTATGCGTACCAGG
AGCCCGACGATGGCTGCCATATCAACTGTCAGCCGGAGACGGCGGTATAC
CCGCTACAATCGGAGCCTGTCCAGGAGCCAGTGGTGCAGCCAACTCAGGA
GCAGCAACAGTCCAGAACAAACATCAATTCAGAGCAGGATCCTGGCAAGA
TTCATGATACCATCAATGAAGTCCTGGAGTACATACAACAACGAATCCTG
CCTACGTTGCCAATTAAAGGGGAGTAAAAGCTTTCTAGACCAT
BS20182.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:47:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13155-RA | 711 | CG13155-PA | 1..711 | 17..727 | 3555 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:47:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13155-RA | 751 | CG13155-RA | 1..717 | 12..728 | 3570 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:47:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12379798..12380428 | 640..10 | 3140 | 99.8 | Minus |
| 2R | 25286936 | 2R | 12379648..12379735 | 728..641 | 440 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:47:28 has no hits.
BS20182.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:31:38 Download gff for
BS20182.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13155-RA | 6..714 | 17..725 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:42:34 Download gff for
BS20182.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13155-RA | 6..714 | 17..725 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:49:11 Download gff for
BS20182.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13155-RA | 6..714 | 17..725 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:49:11 Download gff for
BS20182.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12379651..12379735 | 641..725 | 100 | <- | Minus |
| 2R | 12379798..12380421 | 17..640 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:42:34 Download gff for
BS20182.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8267156..8267240 | 641..725 | 100 | <- | Minus |
| arm_2R | 8267303..8267926 | 17..640 | 100 | | Minus |
BS20182.pep Sequence
Translation from 16 to 726
> BS20182.pep
MDTRLLTALLLIAACRAEDPDLGQDQDQAKITFKPGRYVPRLHGATGWYV
PDDSGKYRHDPRPYDGGYGDRGVPYDSDLSGIFRNAQRQLEAKVQEAGEG
LSLGPRDHLRFMIDFNFNGTGWQIIQFQWVRDGDESHPDTKEYSYLTENK
LWDSDQAYAYQEPDDGCHINCQPETAVYPLQSEPVQEPVVQPTQEQQQSR
TNINSEQDPGKIHDTINEVLEYIQQRILPTLPIKGE*
BS20182.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:57:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13155-PA | 236 | CG13155-PA | 1..236 | 1..236 | 1287 | 100 | Plus |
