Clone BS20183 Report

Search the DGRC for BS20183

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:201
Well:83
Vector:pDNR-Dual
Associated Gene/TranscriptCG13460-RB
Protein status:BS20183.pep: gold
Sequenced Size:641

Clone Sequence Records

BS20183.complete Sequence

641 bp assembled on 2011-01-07

GenBank Submission: KX805896

> BS20183.complete
GAAGTTATCAGTCGACATGCGTCTGTTCGTGGCTCTGGTTTGTGTCAGTT
TGGTGGCAGTGTCATCTGCCCAGTTGTCACTGCGCGGAAGATTGGGACGC
TCATCGAAGGTGGATTTGGCAGTGGAGACACCCACTTTGCTGGCCAAGAC
AGCCGGACTTGTGCCCACTGTGCTTGTGAAAAATGCCGGCATAGTGCCCA
CTGTGTTGGTAAAGAATGCAGCCCAAATCTTACCTGCCGTCAATGTTGCC
GCCGATGTGGAAACGCCCAGCATCTTGCCCCAAGTGTCCAACAACATCTT
GCCCTACTATCCCCGCTACTGGCCCGACTATGGATCCTATGGATCCTATG
GCTATCCCGGCGGCTGGAACAGTCCCAGCTACTGGAATAATAACTACTAC
GACTATGGAGCACCCTATTTGCCCAGACGTCGTTTTGTTAAGCCCGTTGT
GTCCCCTGCCGTGATCACTGCACCCACTTCCACTGGCTCCTCGTCCACCA
GCAGCACTACTACCACTGTTTCTGGTGAGGATTCGCCATCTGTGACTACC
GATGTCGTTCCCGATCAGTCGGACGCTTCCGAAAATCAGGTTGCTGAACC
CGTGGTCACGACCCAGGTGATCTAAAAGCTTTCTAGACCAT

BS20183.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:47:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG13460-RB 609 CG13460-PB 1..609 17..625 3045 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:47:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG13460-RB 677 CG13460-RB 30..638 17..625 3045 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:47:32
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15061068..15061676 625..17 3045 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:47:33 has no hits.

BS20183.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:31:40 Download gff for BS20183.complete
Subject Subject Range Query Range Percent Splice Strand
CG13460-RB 30..636 17..623 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:42:37 Download gff for BS20183.complete
Subject Subject Range Query Range Percent Splice Strand
CG13460-RB 30..636 17..623 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:49:12 Download gff for BS20183.complete
Subject Subject Range Query Range Percent Splice Strand
CG13460-RB 30..636 17..623 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:49:12 Download gff for BS20183.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15061070..15061676 17..623 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:42:37 Download gff for BS20183.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15054170..15054776 17..623 100   Minus

BS20183.pep Sequence

Translation from 16 to 624

> BS20183.pep
MRLFVALVCVSLVAVSSAQLSLRGRLGRSSKVDLAVETPTLLAKTAGLVP
TVLVKNAGIVPTVLVKNAAQILPAVNVAADVETPSILPQVSNNILPYYPR
YWPDYGSYGSYGYPGGWNSPSYWNNNYYDYGAPYLPRRRFVKPVVSPAVI
TAPTSTGSSSTSSTTTTVSGEDSPSVTTDVVPDQSDASENQVAEPVVTTQ
VI*

BS20183.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:57:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG13460-PB 202 CG13460-PB 1..202 1..202 1034 100 Plus