BS20184.complete Sequence
668 bp assembled on 2011-01-07
GenBank Submission: KX803208
> BS20184.complete
GAAGTTATCAGTCGACATGATTGCCAAGCTGCGCAAGATTTATCCCAGTG
GAAAGGTGGTTAGCCATTCCCTCGCTCCCTGCTCCACAGCGGATCTGAAC
AATGCTGAACTTGTTTCCAATGTCAAGAAAAGGCGAGCCGAATATCTCGT
CGAACGAATGCAGCGACTGCTGCTCTTTCTGACCGTCTTCCTTCTGTTTC
CCGTGGTGATCTTCGTCATCTTCAAGTTCTTGATTATGGAGCCGCTCTAC
GGAAACAGCGATGACAATGTGGGCATTGGATCCGGCGTAGCCACGGTAAT
TGTGATGCATGTCCTGGTCACGGGCTATATCCTGCGCCTGATCTTCCTTC
AAGAGATTTCGAGCATGGAGAAGCTGGAGTGGGAAGTTCTGATGCCACCA
AACACCCAAATTCATGGATCCGTGTTCATTGTCCTGCTGCTGATGTCCTA
CTGTTCCCTAATAATTGGCTTTCCCATAGCCACCTTTTTTGCCCTGAAAT
TTGTGGTGCTCAAGAGCTATGCCCATATCAATGCCGATATTATTTCGACC
ATTTGCACCGTAGTTGCAGTTCATGCAGCAGTTGGCTTTTACATCTACCG
AGCCATCTATGCAAAGAGTGTGACGGCCAAAAGCGCCAAAATATCTCTGT
AAAAGCTTTCTAGACCAT
BS20184.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:47:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13829-RA | 636 | CG13829-PA | 1..636 | 17..652 | 3180 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:47:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13829-RA | 810 | CG13829-RA | 21..658 | 17..654 | 3190 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:47:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 23160629..23161157 | 654..126 | 2645 | 100 | Minus |
3R | 32079331 | 3R | 23161208..23161318 | 127..17 | 555 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:47:37 has no hits.
BS20184.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:31:41 Download gff for
BS20184.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13829-RA | 21..654 | 17..650 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:42:39 Download gff for
BS20184.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13829-RA | 21..654 | 17..650 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:49:13 Download gff for
BS20184.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13829-RA | 21..654 | 17..650 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:49:13 Download gff for
BS20184.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23160633..23161155 | 128..650 | 100 | <- | Minus |
3R | 23161208..23161318 | 17..127 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:42:39 Download gff for
BS20184.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18986355..18986877 | 128..650 | 100 | <- | Minus |
arm_3R | 18986930..18987040 | 17..127 | 100 | | Minus |
BS20184.pep Sequence
Translation from 16 to 651
> BS20184.pep
MIAKLRKIYPSGKVVSHSLAPCSTADLNNAELVSNVKKRRAEYLVERMQR
LLLFLTVFLLFPVVIFVIFKFLIMEPLYGNSDDNVGIGSGVATVIVMHVL
VTGYILRLIFLQEISSMEKLEWEVLMPPNTQIHGSVFIVLLLMSYCSLII
GFPIATFFALKFVVLKSYAHINADIISTICTVVAVHAAVGFYIYRAIYAK
SVTAKSAKISL*
BS20184.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:57:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13829-PA | 211 | CG13829-PA | 1..211 | 1..211 | 1046 | 100 | Plus |